PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc024686.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 459aa MW: 53105.9 Da PI: 7.1914

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc024686.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53	1.2e-16	193	288	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 ++Yn+YA+ +GF+v+ks+++++ ++g ++++ ++ ++eg +++ + + ++k+ r++ + tgC a++ ++++ +g++e+tk+ Cse_sc024686.1_g030.1 193 EMYNKYAEVAGFEVKKSAQRNT-KSGLVKSKYLMRNREGVPKDININtldlksSDKQVRNTRQRVTGCMARIFITLDPiSGEYEITKF 279 58************998887.7888**********998888899998888899999999******************* PP FAR1 82 eleHnHela 90 + +HnH + Cse_sc024686.1_g030.1 280 VAKHNHLMI 288 ****875 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MTDPTPSSIQ HRHCSTTITA PPPSPLHHDH RSTTIIKEKS YMLHHHDRSN TIINPAPSLL 60 HNHNCSTTIT APPRSPLHHH HQSTTITAPP SSIHHDHRSP LIMENNDVVD ENIYEDELMV 120 DAKVMNVDDT LVDAEIMEEE DTPVIQGPVM TPRPTLYAHE ETPGGSVYWE PIVDHIYLPV 180 EGKKFKTIEE CIEMYNKYAE VAGFEVKKSA QRNTKSGLVK SKYLMRNREG VPKDININTL 240 DLKSSDKQVR NTRQRVTGCM ARIFITLDPI SGEYEITKFV AKHNHLMIPK EYEHLTKKQR 300 KMTQAEKIEL VAMFWADEVA KCNYKEFGDI VSFDATFRTN KYDMVFVPFT GIDSHKKCMT 360 LGAGMLLRED KEAYTWLLKS FMTTHQKQPK MIVTDQDGAM KLAIEEVFTE SKHRLCMWHI 420 TQKIPSKICK KIYNETDFKK RFNKIVWNMF MEPLEFEEK

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MTDPTPSSIQ HRHCSTTITA PPPSPLHHDH RSTTIIKEKS YMLHHHDRSN TIINPAPSLL  60
HNHNCSTTIT APPRSPLHHH HQSTTITAPP SSIHHDHRSP LIMENNDVVD ENIYEDELMV  120
DAKVMNVDDT LVDAEIMEEE DTPVIQGPVM TPRPTLYAHE ETPGGSVYWE PIVDHIYLPV  180
EGKKFKTIEE CIEMYNKYAE VAGFEVKKSA QRNTKSGLVK SKYLMRNREG VPKDININTL  240
DLKSSDKQVR NTRQRVTGCM ARIFITLDPI SGEYEITKFV AKHNHLMIPK EYEHLTKKQR  300
KMTQAEKIEL VAMFWADEVA KCNYKEFGDI VSFDATFRTN KYDMVFVPFT GIDSHKKCMT  360
LGAGMLLRED KEAYTWLLKS FMTTHQKQPK MIVTDQDGAM KLAIEEVFTE SKHRLCMWHI  420
TQKIPSKICK KIYNETDFKK RFNKIVWNMF MEPLEFEEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-25	FAR1 family protein