PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc024407.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 785aa MW: 89788.7 Da PI: 6.8641

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc024407.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.7	0.00012	134	166	6	32
HHHHHHHHHHHHHHHHHHHCTSCC.C....... CS HLH 6 nerErrRRdriNsafeeLrellPk.as.....k 32 ++E+r+R ++++ f+ r+ lP+ ++ Cse_sc024407.1_g020.1 134 AIIEQRYRTNVRDLFAYVRKKLPWaDPkivkkL 166 689*********************443555550 PP

Sequence ? help Back to Top
Protein Sequence Length: 785 aa Download sequence
MVEAVIDLFL KIGLDERTAT TITNKKVTDN LVAIINEAGV TDGCDGSTGK LLYTVVTKFP 60 AIALVHRPKL LEYIVSSKIK TPAQLEAAFT FFTVTGSEDL DINKFEEACG VGIEVSREDI 120 EHTVDELFEE KKSAIIEQRY RTNVRDLFAY VRKKLPWADP KIVKKLIDSE LYALLGEKTA 180 ADNEKKKEKP AKVEDKDATK EAPEAVPSEE LNPYSDFPAP EENYKVHTEV YFSDDRPVLR 240 ACNSKAILEK HLEATGGKVR TRFPPEPNGY LHIGHAKAMF VNFGLAKDRK GDCYLRFDDT 300 NPTAEKQEYI DHIKDIVSWM GWEPFKITYT SDYFPRLYDL AVELIHRGHA YVDHQTGDEI 360 KEYREKKMNS PWRDRPISES LKLFNDMKEG RIDEGKATLR MKQDMQSDNG NMYDLIAYRI 420 KASFLSNTDI CFSRFKTTLT HTPFCMDPQF IPHPHAGDKW CIYPSYDYAH CIVDSLENIT 480 HSLCTLEFET RRASYYWLLD ALSLYKPYVW EYSRLNITNN VMSKRKLNLL VSKKIVDGPD 540 DPRLLTLAGL MRRGVPSTAI NTFVRGIGIT RSDGSMIRLE RLENHVRDEL NKSAPRTMVV 600 LDPLKVVITN LGDSSVIYRD AKKWPDAPND DASSYYKVPF SNVVYIERDD FRLIDSKDYK 660 GLAPGKTVLL RYAFPIKCTN MGVLHWVAEP SPGVDPLKVE VRLFDKLFKS EDPAKLDNWL 720 DDLNPESKVV IPCAYGVPSL KFAAVGDKFQ FERKGYFVVD KDSTPEKLVF NRIVTMRDTY 780 KRGNK

Sequence ? help Back to Top

Protein Sequence Length: 785 aa Download sequence

MVEAVIDLFL KIGLDERTAT TITNKKVTDN LVAIINEAGV TDGCDGSTGK LLYTVVTKFP  60
AIALVHRPKL LEYIVSSKIK TPAQLEAAFT FFTVTGSEDL DINKFEEACG VGIEVSREDI  120
EHTVDELFEE KKSAIIEQRY RTNVRDLFAY VRKKLPWADP KIVKKLIDSE LYALLGEKTA  180
ADNEKKKEKP AKVEDKDATK EAPEAVPSEE LNPYSDFPAP EENYKVHTEV YFSDDRPVLR  240
ACNSKAILEK HLEATGGKVR TRFPPEPNGY LHIGHAKAMF VNFGLAKDRK GDCYLRFDDT  300
NPTAEKQEYI DHIKDIVSWM GWEPFKITYT SDYFPRLYDL AVELIHRGHA YVDHQTGDEI  360
KEYREKKMNS PWRDRPISES LKLFNDMKEG RIDEGKATLR MKQDMQSDNG NMYDLIAYRI  420
KASFLSNTDI CFSRFKTTLT HTPFCMDPQF IPHPHAGDKW CIYPSYDYAH CIVDSLENIT  480
HSLCTLEFET RRASYYWLLD ALSLYKPYVW EYSRLNITNN VMSKRKLNLL VSKKIVDGPD  540
DPRLLTLAGL MRRGVPSTAI NTFVRGIGIT RSDGSMIRLE RLENHVRDEL NKSAPRTMVV  600
LDPLKVVITN LGDSSVIYRD AKKWPDAPND DASSYYKVPF SNVVYIERDD FRLIDSKDYK  660
GLAPGKTVLL RYAFPIKCTN MGVLHWVAEP SPGVDPLKVE VRLFDKLFKS EDPAKLDNWL  720
DDLNPESKVV IPCAYGVPSL KFAAVGDKFQ FERKGYFVVD KDSTPEKLVF NRIVTMRDTY  780
KRGNK