PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc024372.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 137aa MW: 15465.7 Da PI: 8.8219 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 28.7 | 4.5e-09 | 14 | 76 | 35 | 90 |
FAR1 35 Cskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 C+keg ++ + + ++k++r+++ + tgCka+++ + + k++++ +++ HnHel Cse_sc024372.1_g010.1 14 CNKEGCPKGIHVDtldlenSDKQKRSSNLHITGCKARVMFDLIPgTTKYKLSAFDTIHNHELE 76 99999888777777888878899999999***************9****************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MNNQPSNDGV IPTCNKEGCP KGIHVDTLDL ENSDKQKRSS NLHITGCKAR VMFDLIPGTT 60 KYKLSAFDTI HNHELEREEY KHLSKTERQL TYVEQVFIVK AANVIGATRV YHVLIGLKGS 120 YLLVHGTTVD LKNFLRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-06 | FAR1 family protein |