PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc024305.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 400aa MW: 45218.4 Da PI: 8.7608

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc024305.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	94.9	5.3e-30	99	203	1	99
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+kv tpsdv+k++rlv+pk++ae++ ++++ ++ l +ed +g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ Cse_sc024305.1_g020.1 99 FDKVVTPSDVGKLNRLVIPKQHAERYfpldSSNNDKGLLLNFEDMNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQR 186 89*************************9666678899**********************************************6 PP -.SS.SEE..EEEEE-S CS B3 85 d.gr.sefelvvkvfrk 99 g s+ +l++ +r+ Cse_sc024305.1_g020.1 187 GvGAtSKDRLFIDCRRR 203 55777888888888776 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MNFIRKIGCS GEDITEIRQP PKIDRWVPSS SASHQQRYCQ PQQQQHEPQQ QPKPFLSPLP 60 YHPHNRCGWV ADSQSPVGEP SSNKNEEERG MLVEREHMFD KVVTPSDVGK LNRLVIPKQH 120 AERYFPLDSS NNDKGLLLNF EDMNGKLWRF RYSYWNSSQS YVMTKGWSRF VKEKKLDAGD 180 IVSFQRGVGA TSKDRLFIDC RRRVNSSSPS HQLSSSNISL IHPWNPLVLQ SFPAKRNPNM 240 ILQPPNNNFF YNTNWDGNNL DRSRSFYFGP SVFGAQQQHV QMMQRNGFGF GVGVDPSPTS 300 PSLTQPVHGK SSGKRLRLFG VNMDCSFSEE ENEQDPHHRT LIPSPSSSSS FSTIPYLQLN 360 SYGGGTECNP SSILSSSSSA HDFNIVAKST ASNMSLDLDI

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MNFIRKIGCS GEDITEIRQP PKIDRWVPSS SASHQQRYCQ PQQQQHEPQQ QPKPFLSPLP  60
YHPHNRCGWV ADSQSPVGEP SSNKNEEERG MLVEREHMFD KVVTPSDVGK LNRLVIPKQH  120
AERYFPLDSS NNDKGLLLNF EDMNGKLWRF RYSYWNSSQS YVMTKGWSRF VKEKKLDAGD  180
IVSFQRGVGA TSKDRLFIDC RRRVNSSSPS HQLSSSNISL IHPWNPLVLQ SFPAKRNPNM  240
ILQPPNNNFF YNTNWDGNNL DRSRSFYFGP SVFGAQQQHV QMMQRNGFGF GVGVDPSPTS  300
PSLTQPVHGK SSGKRLRLFG VNMDCSFSEE ENEQDPHHRT LIPSPSSSSS FSTIPYLQLN  360
SYGGGTECNP SSILSSSSSA HDFNIVAKST ASNMSLDLDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	4e-65	B3 family protein