PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024288.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 340aa    MW: 39671.4 Da    PI: 6.6487
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024288.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.91.6e-52301581128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                            +ppGfrFhPt+eelv +yLk+kve+ +++l +vi ++d+y++ePwd++      ++e++ew+fFs++d+ky+tg+r+nrat++g+Wka
  Cse_sc024288.1_g020.1  30 VPPGFRFHPTEEELVGYYLKRKVESLHIDL-DVIVDIDLYRMEPWDIEGrckLGYEEQNEWFFFSHKDRKYPTGTRTNRATSAGFWKA 116
                            69****************************.99**************952432234677***************************** PP

                    NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                            tg+dk+vls k++ +g++ktLvfy+grap+g+k+dW+mheyrl
  Cse_sc024288.1_g020.1 117 TGRDKAVLS-KDRIIGMRKTLVFYNGRAPNGRKSDWIMHEYRL 158
                            *********.8899***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MVYCTLKSLD LTLMVRNNQS IYMEFESSCV PPGFRFHPTE EELVGYYLKR KVESLHIDLD  60
VIVDIDLYRM EPWDIEGRCK LGYEEQNEWF FFSHKDRKYP TGTRTNRATS AGFWKATGRD  120
KAVLSKDRII GMRKTLVFYN GRAPNGRKSD WIMHEYRLQS SHHAPPQASY NTFHYIKQEL  180
EEGWVVCRAF KKPTPIQPWN NGYHIRNTNN FRALPPINDT SNPSQSFFVN QARNPKQLLL  240
RDKEKRPSAN NFLHEHSNII DSPSASRSLA TNEDLDYESG INSNLYDNDW KNITNLLESE  300
LDKPTPFPDS TMPLIAFHND NNELDSLDQP SHFFGCFTEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-101NAC family protein