PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc024203.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 595aa MW: 68019.1 Da PI: 9.3056 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 54.5 | 3.8e-17 | 138 | 232 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 +Y +YA+e+GF +rks++k r+g ++++ +vC++eg +++ + + +k+ rt++ t+Cka+ + +++ + k+++t+++ Cse_sc024203.1_g020.1 138 MYMRYASEAGFGIRKSTQKIL-RDGFVKEKYLVCNREGCPKKIRLNtlapkkGDKQVRTSNLRITDCKARAVFHMMPgSRKYRLTTFD 224 8**************998776.9999**************9988888999877888899999***************9********** PP FAR1 83 leHnHela 90 eHnHel Cse_sc024203.1_g020.1 225 VEHNHELD 232 ******95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 595 aa Download sequence |
MVQLSKVQIA KDQYQGFNSK GSIAKVNHHI LHRHHRTTTV ITVTSSTLSH RMEIFYLNEV 60 LVSVGEDSID LDVTSSICAS NVDDNASSSS GLKTPSSFIH HDFIDTPGGS VFWVPKVAAS 120 VLPVLFSVYD YVEDCISMYM RYASEAGFGI RKSTQKILRD GFVKEKYLVC NREGCPKKIR 180 LNTLAPKKGD KQVRTSNLRI TDCKARAVFH MMPGSRKYRL TTFDVEHNHE LDHVEYKHLS 240 KSERKLTYTE QLFIIKASNY NIGATRAHSS YTGLKGSSAL VHGTDTKFNN LVRGINCFIG 300 DSDAQMLINR MEDRKKFTSD FSFDYLVENA ELIGLFWADQ VAKLNYKEFG DIVSFDATYK 360 TNKRSVTVGS GLLKNETTES YVWLLQAFKK AFVHSPNIIV TDQDGAMQKA IAEVLPDSKH 420 GLCMWHIMQK LPSKIVSRIY EDTDFKNKFH KIVWNMYIGP EEFEIRWNDL MVEFGLLNPK 480 WLNKMYRIRA SWIPAFFVDS PLCGLMRTTS RSESENSFFS HFTSPTSTLV KFMVCYESAM 540 EKQRYIQERL DHPALLTPLA IEIHAARFYT PKLFVLVQKE IIAGSWLCSI KSKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 6e-48 | FAR1 family protein |