PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024148.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 287aa    MW: 33311.2 Da    PI: 6.7397
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024148.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR133.81.1e-1075148169
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvk 69 
                            ++Y++YA+  GF+++k+ ++ + ++g +  +  +C+keg +++ + +      +ek++r+++ + tgC+a+++ +
  Cse_sc024148.1_g030.1  75 DMYSTYAEAGGFQIKKAGQRLT-KSGVVQAKYIMCNKEGAPRHINVDtldpkhSEKQKRNTTLHVTGCQARIRYN 148
                            58***************98887.8888999999*******9998888899998999999999*********9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MPPVDETDLT EVLVDESQDK DDGVNETTDS MRSPRPTLYE HTETPGGSIY WEPHVEGIVV  60
PEEGKYYDTI EEAIDMYSTY AEAGGFQIKK AGQRLTKSGV VQAKYIMCNK EGAPRHINVD  120
TLDPKHSEKQ KRNTTLHVTG CQARIRYNMV FVPFTGVDNH KKCVTLGSGM LLKEDTESYT  180
WLLKAFMTAF SKEPTMVVTD QDGAMKRAIE AVFTKSKHRL CMWHIHHKIP AKICKEIYNE  240
TDFKKRLNKI IWNMFMEPME FEEKWAKLIE DFDLQNHKWM TKMFKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-23FAR1 family protein