PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc023817.1_g080.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 554aa MW: 63226.8 Da PI: 4.9664

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc023817.1_g080.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.1	2.3e-06	395	431	14	55
HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + iN++f+ L +++P++ +K++K + L +++Y+k L+ Cse_sc023817.1_g080.1 395 NGINHRFSVLSSIVPSR-----GKVDKLSLLDDTINYLKTLE 431 569***********9.....9**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MENLRQLLAM AVKSIQWSYA IFWSTSLTEQ GRVLTWCDGY YNGDIKTRKT IQAEGMNEDD 60 DDGQVGLQRT EQLRQLYESL SEAETHHYEP QARRPSAALS PEDLTDTEWY FLVCMTFEFS 120 YGQGLPGRTL AKNTTSWLSD AHLADSKVFT RSLLAKSASI QTVLCIPYLE GIVEFGITEK 180 VLEEQNIIQR IKSLIFKAPP QEIHEIPLES CSVMLDHDLI HNNVNSMLEY DQRLVSKPHN 240 SPKNSFGAFQ SHEQSWQFVD DDGDDEDDEE EGEVSYHHNN SMGSSDCVSQ NLASRRAADL 300 WSDDDSRYQC VLSKIFKNTQ RSIMGPQYRN SDSKESAFVS WKNYDGMEWK RSSSQMLLKN 360 VLYEVPKMHE NHLGQYYDKN GNLDLMREVA FNDVNGINHR FSVLSSIVPS RGKVDKLSLL 420 DDTINYLKTL ERKVEALQSS KKSHDVQERT SDNYAKKRKA ACDLEDLQEE CSSDCITVSA 480 IEKDVTIEIR CKWRENMMVQ VFDAMSSLNL ESHSVCSSTV DGILTLSIET KLKSCAASTA 540 KMIRQALQRV IGRY

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MENLRQLLAM AVKSIQWSYA IFWSTSLTEQ GRVLTWCDGY YNGDIKTRKT IQAEGMNEDD  60
DDGQVGLQRT EQLRQLYESL SEAETHHYEP QARRPSAALS PEDLTDTEWY FLVCMTFEFS  120
YGQGLPGRTL AKNTTSWLSD AHLADSKVFT RSLLAKSASI QTVLCIPYLE GIVEFGITEK  180
VLEEQNIIQR IKSLIFKAPP QEIHEIPLES CSVMLDHDLI HNNVNSMLEY DQRLVSKPHN  240
SPKNSFGAFQ SHEQSWQFVD DDGDDEDDEE EGEVSYHHNN SMGSSDCVSQ NLASRRAADL  300
WSDDDSRYQC VLSKIFKNTQ RSIMGPQYRN SDSKESAFVS WKNYDGMEWK RSSSQMLLKN  360
VLYEVPKMHE NHLGQYYDKN GNLDLMREVA FNDVNGINHR FSVLSSIVPS RGKVDKLSLL  420
DDTINYLKTL ERKVEALQSS KKSHDVQERT SDNYAKKRKA ACDLEDLQEE CSSDCITVSA  480
IEKDVTIEIR CKWRENMMVQ VFDAMSSLNL ESHSVCSSTV DGILTLSIET KLKSCAASTA  540
KMIRQALQRV IGRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63650.1	1e-133	bHLH family protein