PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc023691.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 350aa MW: 39959.7 Da PI: 8.7758

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc023691.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.7	1.3e-54	21	147	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrFhP+deel+++yL +kv ++++ + ++i evd++++ePw+Lp+ +k +ekewyfF+ rdkky+tg r+nrat+ gyWkatgk Cse_sc023691.1_g050.1 21 LPPGFRFHPRDEELITHYLSNKVVDNNFCA-KAIGEVDMNRIEPWELPRLAKMGEKEWYFFCVRDKKYPTGMRTNRATAGGYWKATGK 107 79***********************998.88***********8888899***************************** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 dk++++ ++ lvg+kktLvfykgrapkgekt+Wv+heyrle Cse_sc023691.1_g050.1 108 DKDIYR-RKLLVGMKKTLVFYKGRAPKGEKTNWVIHEYRLE 147 **.999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MTESFNQSGL VKKDDQMDLQ LPPGFRFHPR DEELITHYLS NKVVDNNFCA KAIGEVDMNR 60 IEPWELPRLA KMGEKEWYFF CVRDKKYPTG MRTNRATAGG YWKATGKDKD IYRRKLLVGM 120 KKTLVFYKGR APKGEKTNWV IHEYRLEGKS SQQLPTSAKN EWVIIRVFHK NSGGTKVHIP 180 GLMKMNSGDN ELIPASLPSL IDSPVVAYGE KMLKPITPDP INVPCFSNPI NIQQKDMFNT 240 FLNNPNYTFN AISAGQYVNH MKGNFQSPQS LPFRANDQAI LRGLIENYGQ IMKVERETVT 300 CSQDTGLSTE MNNEIESVMS NLEMGKRKFE DQEIASTSMG AIDMDSLWNY

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MTESFNQSGL VKKDDQMDLQ LPPGFRFHPR DEELITHYLS NKVVDNNFCA KAIGEVDMNR  60
IEPWELPRLA KMGEKEWYFF CVRDKKYPTG MRTNRATAGG YWKATGKDKD IYRRKLLVGM  120
KKTLVFYKGR APKGEKTNWV IHEYRLEGKS SQQLPTSAKN EWVIIRVFHK NSGGTKVHIP  180
GLMKMNSGDN ELIPASLPSL IDSPVVAYGE KMLKPITPDP INVPCFSNPI NIQQKDMFNT  240
FLNNPNYTFN AISAGQYVNH MKGNFQSPQS LPFRANDQAI LRGLIENYGQ IMKVERETVT  300
CSQDTGLSTE MNNEIESVMS NLEMGKRKFE DQEIASTSMG AIDMDSLWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-125	NAC family protein