PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc023633.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 648aa MW: 76534.5 Da PI: 7.2213

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc023633.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.2	2.7e-18	170	245	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fYn+YA GF ++++ ++k+k+++e++++ +vC+k+g++e++++ tgC+a+l+++k+kd kw+v+ ++ HnHel Cse_sc023633.1_g020.1 170 FYNQYAFLHGFGICIHWKYKNKTKNEVYRKLYVCNKQGFKEQKRD-------------TGCEAELRISKTKDRKWCVDIFNDTHNHEL 244 *************************************998654.............6**************************9 PP FAR1 90 a 90 + Cse_sc023633.1_g020.1 245 T 245 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 648 aa Download sequence
MKGYPSWPAK VSKPEEWGYK AHLKKVLVFF FGTQQMSLLK KKDQSFQRIS RVLIHNMDLE 60 NQQIRDHFET HLIEDIDTNG YLFDHQTPPY ECEEQNFEHV DLRCDEDGVY KDNICEETND 120 YDVNIRYDDD EVNNDDIWKK PNEDQVNLGC DENDNIIGKI FDTPNDAYTF YNQYAFLHGF 180 GICIHWKYKN KTKNEVYRKL YVCNKQGFKE QKRDTGCEAE LRISKTKDRK WCVDIFNDTH 240 NHELTTTPTK VMKHRSHNKF HCSMACKSLM VELGKSGLRP CQVRKAVNAM KSPNEPTVTS 300 KQCAVILAEE QKQYKGKEFY SLIKHFQEKA AVDANQYFKI DLFDDGSPRN IFWADGRSRD 360 AYLKIGDIVV FDVTYLTNKF KFPFAPFVGV NHHGQSIIFD GALLENEKDE TFKWLFKQFL 420 KCMFNKCPSA TITDQDKAIF NAVKHVLPNT RHRYCAWHIK KHILEHLQPF RARYTDFQES 480 FKQWVRSDTV EEFESQWEVL RDKYNFETSS WMMEMYNQRK FWVTAFFKDI FLAGMTTSGR 540 SESIHSFFDG FMNSKTMLNE FVIQFDKAVE TRRAAKEDED FKTMNSRPIL SSIHPIEAKA 600 GECYTKKIFE VFQKEWIEAT NNLSHKTKSK SEENSSYWVG QVNADKKY

Sequence ? help Back to Top

Protein Sequence Length: 648 aa Download sequence

MKGYPSWPAK VSKPEEWGYK AHLKKVLVFF FGTQQMSLLK KKDQSFQRIS RVLIHNMDLE  60
NQQIRDHFET HLIEDIDTNG YLFDHQTPPY ECEEQNFEHV DLRCDEDGVY KDNICEETND  120
YDVNIRYDDD EVNNDDIWKK PNEDQVNLGC DENDNIIGKI FDTPNDAYTF YNQYAFLHGF  180
GICIHWKYKN KTKNEVYRKL YVCNKQGFKE QKRDTGCEAE LRISKTKDRK WCVDIFNDTH  240
NHELTTTPTK VMKHRSHNKF HCSMACKSLM VELGKSGLRP CQVRKAVNAM KSPNEPTVTS  300
KQCAVILAEE QKQYKGKEFY SLIKHFQEKA AVDANQYFKI DLFDDGSPRN IFWADGRSRD  360
AYLKIGDIVV FDVTYLTNKF KFPFAPFVGV NHHGQSIIFD GALLENEKDE TFKWLFKQFL  420
KCMFNKCPSA TITDQDKAIF NAVKHVLPNT RHRYCAWHIK KHILEHLQPF RARYTDFQES  480
FKQWVRSDTV EEFESQWEVL RDKYNFETSS WMMEMYNQRK FWVTAFFKDI FLAGMTTSGR  540
SESIHSFFDG FMNSKTMLNE FVIQFDKAVE TRRAAKEDED FKTMNSRPIL SSIHPIEAKA  600
GECYTKKIFE VFQKEWIEAT NNLSHKTKSK SEENSSYWVG QVNADKKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-89	FAR1 family protein