PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc023612.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 288aa    MW: 31481.8 Da    PI: 8.0325
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc023612.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.79e-212372255
                    AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           +y+GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+++l+g
  Cse_sc023612.1_g020.1 23 RYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAALSLRG 72
                           59*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MPRGRPTTGA TKPDVPGSGS DIRYRGVRKR PWGRYAAEIR DPWKKTRVWL GTFDSAEDAA  60
RAYDAAALSL RGPKARTNFA FHSAQPIDGN NNNNNYYQYQ NNNQFSYNVA NGISGLNQVP  120
EYQNIVRPTC SSLSSTLESF SGPRPMTNVV RLARQEPRRR VDDCRSDCDS SSSVVDDDGV  180
LGHEDGVVCS SFTKPFLSFD LNMPPPFEDD DIDCTRCSCF DSTRVGKNPS PLETEARVRS  240
SLPAKKAGGP LEAPHSLQKG VGGPLETASL PSGRSEAEAL VKDGIGYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.13e-22ERF family protein