PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc023534.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 505aa MW: 59225.7 Da PI: 7.0668

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc023534.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.5	8.9e-18	102	197	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 ++Yn+YA+ GF+++ks ++ + ++g + ++ +C+keg +++ + + ++k++r+++ + tgCka++++++++ +gk+++ ++ Cse_sc023534.1_g020.1 102 EMYNTYAEAGGFQTKKSGQRLT-KSGMVEHKYIMCNKEGIPRRINIDtldpqnSDKQKRNTTLHITGCKARIRLELDQvSGKYKLVQF 188 58*************98888.7888*********99877777889888899999999********************* PP FAR1 82 eleHnHela 90 +HnH l Cse_sc023534.1_g020.1 189 IAKHNHVLI 197 ****996 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MNENQNLIDA IDENNLIEVP LDVVNTTSVV DDLPDLEDDL QEVEDTIDFV EKEIEDSMRS 60 PRPTLYEHSE TPGGSIYWEP HVEGIRVPEE GKYYDTVEEA IEMYNTYAEA GGFQTKKSGQ 120 RLTKSGMVEH KYIMCNKEGI PRRINIDTLD PQNSDKQKRN TTLHITGCKA RIRLELDQVS 180 GKYKLVQFIA KHNHVLIPKE YKHFTKKQRR MTQADKMFIV KAATNKIGAT RAHNFLTSLK 240 GGYEYVHGTS DDFKNHQRNI NAFIWESDAE MLINKMENRK MYVPNFTFQY KVQNSELVAM 300 FWADEVAKCN YKEFGDIVSF DATFRSNKYH MVFVPFTGVD NHRKCVTFGS RMLLKEDIES 360 YTWLLTAFMS AFKKEPTMVV TDQDGAMKRA IEAVFTNSKH RLCMWHIDQK IPEKICQAIY 420 KETDFKKRFK KIIWNMFMEP LEFEEKWAKL IEDFGLKNHK WMTKMFNLRK MWIPAYFIDS 480 PLFGLMRTTS RSESENSFFK SFTSP

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MNENQNLIDA IDENNLIEVP LDVVNTTSVV DDLPDLEDDL QEVEDTIDFV EKEIEDSMRS  60
PRPTLYEHSE TPGGSIYWEP HVEGIRVPEE GKYYDTVEEA IEMYNTYAEA GGFQTKKSGQ  120
RLTKSGMVEH KYIMCNKEGI PRRINIDTLD PQNSDKQKRN TTLHITGCKA RIRLELDQVS  180
GKYKLVQFIA KHNHVLIPKE YKHFTKKQRR MTQADKMFIV KAATNKIGAT RAHNFLTSLK  240
GGYEYVHGTS DDFKNHQRNI NAFIWESDAE MLINKMENRK MYVPNFTFQY KVQNSELVAM  300
FWADEVAKCN YKEFGDIVSF DATFRSNKYH MVFVPFTGVD NHRKCVTFGS RMLLKEDIES  360
YTWLLTAFMS AFKKEPTMVV TDQDGAMKRA IEAVFTNSKH RLCMWHIDQK IPEKICQAIY  420
KETDFKKRFK KIIWNMFMEP LEFEEKWAKL IEDFGLKNHK WMTKMFNLRK MWIPAYFIDS  480
PLFGLMRTTS RSESENSFFK SFTSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-68	FAR1 family protein