PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc023358.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 322aa    MW: 35246 Da    PI: 6.4064
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc023358.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.3e-10166214355
                            HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                             +h+ +Er RR+ri +++  L+el+P +    +k   Ka +L + ++Y++sLq
  Cse_sc023358.1_g010.1 166 NSHSLAERVRRERISERMKLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 214
                            58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MGSSEGDTNT NNNDSEMGYQ YRGEMSSGTI FNNKSSSGSG NPFGSSWDPL ENFGAYPLMN  60
QYPSGELVPK IGSFGSENFS EMVSPFVPNS SPNSGEKRRA QFDPNMSGER NDGSRDNTCE  120
NDEKKQRVDS RSKQMGKQVK DNSDSGGAAA KDGYIHVRAK RGQATNSHSL AERVRRERIS  180
ERMKLLQELV PGCNKITGKA VMLDEIINYV QSLQQQVEFL SMKLATVNPE VSIDIDRLVF  240
KDILHSRGSS SNPPFGFGPT LSSSHSYPHG NLPGISATTT PLQPIHPQPV WDNDLHNLLQ  300
MGFDANPGIN NLGPNGRAKM DL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.17e-71bHLH family protein