PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc023321.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 334aa MW: 38946.9 Da PI: 6.7838

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc023321.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	27.8	8e-09	24	102	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkle.leHnHela 90 A+ +GF ++k+++k++ +g ++ ++ Csk gk e e ++ +r++++++t+C kl+ k +k++ + + +++ nH+la Cse_sc023321.1_g020.1 24 ARGLGFVIVKTRTKSE--KGWLYEINYGCSKDGKYECEGTE----QRQSSTSKTDCPFKLVAKHHKTKYFWIWRVKdDSYNHDLA 102 8899**99987766..8899***********9877....889999**********977766777663779996 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MVYSWDKHTF ASDEAITDWV QNIARGLGFV IVKTRTKSEK GWLYEINYGC SKDGKYECEG 60 TEQRQSSTSK TDCPFKLVAK HHKTKYFWIW RVKDDSYNHD LAESFHGFSY AMRLNDDEFG 120 LVKQLTEYNV QPRRILSSIK ERNPDNVSSL RTIYNAQAKI RGAITGYRTP IQVLYSHLMH 180 SGYTYYERVN EHNELEELFF VHPTSYAIWC TFPEIMLVDS TYNTTLFKLP FMEITSAGTD 240 DYGCGYFMWK DAFQNKYFSQ ASSSTQCSNC VAKDNKIDQL ETRNKMLLSQ NKMLMTRIKT 300 RETSLEMATN PEDHACWSGA MLHDLIDDIN NLHM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-06	FAR1 family protein