PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc023280.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 335aa    MW: 38278.8 Da    PI: 6.0973
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc023280.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.71.1e-171461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd++l ++++ +G+g+W+t ++  g+ R++k+c++rw +yl
  Cse_sc023280.1_g010.1 14 KGPWTQEEDLKLTEYIQVHGPGNWRTLPKNAGLQRCGKSCRLRWTNYL 61
                           79********************************************97 PP
2Myb_DNA-binding53.94e-1767111147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            rgr++ eE+e +++++  lG++ W++Ia++++ gRt++++k++w+++
  Cse_sc023280.1_g010.1  67 RGRFSFEEEETIIQLHSVLGNK-WSSIAARLP-GRTDNEIKNYWNTH 111
                            89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MGRSPCCDKN GLKKGPWTQE EDLKLTEYIQ VHGPGNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS SIAARLPGRT DNEIKNYWNT HIRKRLLRNG  120
IDPVTHTPRL DLMDLSSILS SAQLNLSNLL NLHTLVNPDV LRLATLLASS SNNESNELFL  180
NNQLINPLNQ TFNQQLPIST SMPTNFQNTQ LLNQQSHNEY FPNNLDNMNC QLINENIMPT  240
CIPENHVVIH SQSDQFKAQS SDTSSFQTSD IETKYKPTNQ NFNFDSVLST PMSSPTPLNS  300
SSTLVNSSST DDDRETYCSM FKFEIPESFE FEDFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28110.12e-86MYB family protein