PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc023182.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 153aa MW: 17833.6 Da PI: 10.1013 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.4 | 9.1e-10 | 2 | 43 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WT +Ede+l+++ k+ ++ W+tIa +g Rt+ qc++r+ + Cse_sc023182.1_g030.1 2 EWTRQEDERLLHLAKLAPSQ-WSTIAPIVG--RTPFQCIERYERL 43 6*****************99.********8..**********876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
TEWTRQEDER LLHLAKLAPS QWSTIAPIVG RTPFQCIERY ERLLDVACAK DGTYESGDDP 60 RKLLRGENDP NMESKPARPD PVDMDKDEIE MLSEARARLA NTRGKKAKRK AREKHLEEAR 120 MLASLQKRRE MKVAGIDYMQ RKRKSKEIVM LRL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 127 | 144 | KRREMKVAGIDYMQRKRK |
2 | 140 | 145 | QRKRKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09770.1 | 3e-63 | MYB family protein |