PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc023168.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | B3 | ||||||||
Protein Properties | Length: 246aa MW: 28158.5 Da PI: 9.9025 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 40.1 | 6.6e-13 | 136 | 228 | 1 | 80 |
EEEE-..-HHHHT.T-EE--HHH.HTT.......---..--SEEEEEETTS..........-EEEEEE...EEETTE.EEE-TTHHHH CS B3 1 ffkvltpsdvlks.grlvlpkkfaeeh.......ggkkeesktltledesg..........rsWevkl.iyrkksgr.yvltkGWkeF 68 f+k lt+ dv+ks grl +p k +++ + + le+++g r+W+++l i++ + ++ yv+++GW++ Cse_sc023168.1_g010.1 136 FEKRLTKTDVTKSqGRLLIPVKQVKKGgfltkyeK-------NILLENKEGlkvqvfdserRTWTLNLgIWCMSCNEnYVFKSGWNKV 216 899*******99989*********99976554440.......5555555555555555555*******7776666667********** PP HHHHT--TT-EE CS B3 69 vkangLkegDfv 80 v+angLke+ ++ Cse_sc023168.1_g010.1 217 VDANGLKENMVI 228 *******98765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MAKTTERVKE KRCRKGVARF LSVIKFRDDN PKVSEIVFAK LAEIRRHKES ANKKLVIKCG 60 GKIFLKNVET KYSREADSPD NPVSNTIFDG VDHSSDDQSV ENMENKYSSL FKDLIISDGV 120 VDYITSIGGS NLELMFEKRL TKTDVTKSQG RLLIPVKQVK KGGFLTKYEK NILLENKEGL 180 KVQVFDSERR TWTLNLGIWC MSCNENYVFK SGWNKVVDAN GLKENMVIRI WSFRVDERLC 240 FALVGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05930.1 | 4e-14 | B3 family protein |