PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc023119.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 301aa MW: 34707 Da PI: 4.843 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 180.5 | 4.2e-56 | 10 | 136 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrFhPtdeel+++yL +kv++++++ +i evd++kvePw+Lp ++k +e+ew+fF+ rd+ky+tg+r+nrat++gyWkatgk Cse_sc023119.1_g010.1 10 LPPGFRFHPTDEELISYYLYPKVSDTTFTS-LAIGEVDLNKVEPWELPWRAKLGEQEWFFFCVRDRKYPTGSRTNRATEAGYWKATGK 96 79*************************988.67***************888999********************************** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 dke+++ +++lvg+kktLvfykgrapkgektdWvmheyrle Cse_sc023119.1_g010.1 97 DKEIYK-EKSLVGMKKTLVFYKGRAPKGEKTDWVMHEYRLE 136 ******.999*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MENHDEQIDL PPGFRFHPTD EELISYYLYP KVSDTTFTSL AIGEVDLNKV EPWELPWRAK 60 LGEQEWFFFC VRDRKYPTGS RTNRATEAGY WKATGKDKEI YKEKSLVGMK KTLVFYKGRA 120 PKGEKTDWVM HEYRLEGIFA TNNLPKSAKG EWVISRVFHK SAGGKKIPIS GLIRMNNGNY 180 YNDDFESGNM PPLMEMSSGE GGSRTEISHV TCFSESMEEQ KPENDEMVGS WSSSSYPMVP 240 SMENFQYQDT TWMQDPSILK ILHDPISDLN VRQNPKIEMV DNQDYGMNLG GQADFDCLWN 300 Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 1e-111 | NAC family protein |