PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc023055.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 229aa MW: 26149.8 Da PI: 9.8803 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.1 | 3.2e-08 | 147 | 193 | 5 | 53 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 ++ E++RR++++s +++L +l+P+++ sk + ++ + +A+eYI++ Cse_sc023055.1_g010.1 147 RKITEKNRRNQMKSFYSNLFSLIPPNV--FSKEGDVSDRVDRAIEYIQM 193 6899*********************74..8999**************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MKIAFLLSIH LSLLVSIHCY GGNGYDPLKT ALNAQRAKRS TIGHATKSEY TYSPVYEGQQ 60 HGLKDADKIS ALPGQPSETD FDQYSGYVTV DPNHGRALFY YFSESPTNSS TNPLVLWLNG 120 VYKPLLRYQH MEGSIKCSAS DLKKPERKIT EKNRRNQMKS FYSNLFSLIP PNVFSKEGDV 180 SDRVDRAIEY IQMSKTHLDM LKNKKEKLSS RKRSHEHTKM INNVCSRHI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 1e-07 | bHLH family protein |