PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc022983.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family M-type_MADS
Protein Properties Length: 248aa    MW: 27862.6 Da    PI: 5.3822
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc022983.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF33.36.1e-111148340
                           --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
                 SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviif 40
                           i ++ +r+ tf  R + + KKA+ELS+LC+ ++ +ii+
  Cse_sc022983.1_g020.1 11 IASDKKRELTFQGRVKSMKKKAYELSTLCGLDIGMIIY 48
                           88999***************************998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MVGVRRRMEL IASDKKRELT FQGRVKSMKK KAYELSTLCG LDIGMIIYIG MIICSPSGQI  60
ETLSWPNQDD DGKTLDDLIK SSGNQGDKRK KIVTRISKGD TQNQAGEQQL DVKSKQFVSC  120
SSQLGEQSGP SISCHSQLDM KSEKELRELA MCFDNNIERV KERIQYLEKE KQVTHQPQVA  180
DDTSLIEDYG IMHPGDLDYL LNMIMDQPLT PIHEDFGTTW PHDLPSLVQP TAAAFASNND  240
TNCHSNIP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
188115KRKKIVTRISKGDTQNQAGEQQLDVKSK