PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc022801.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 260aa    MW: 29716.6 Da    PI: 6.7802
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc022801.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1514.9e-1667160390
                   FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                            Y++   e+GF vr+ ++++    g +++++f C+keg+++ + k+         ++  +r r+e  t+Ckak+ v ++  +k++v+++
  Cse_sc022801.1_g010.1  67 YKDCVVEAGFIVRRGHQTND--GGIVINKEFLCNKEGNKKVKVKEfdslkdncdAKAVKRIRSEFSTNCKAKIYVVRS-GEKYRVKSF 151
                            55556799*******98877..999******************99******998888899999************999.9******** PP

                   FAR1  82 eleHnHela 90 
                            ++eHnH ++
  Cse_sc022801.1_g010.1 152 VEEHNHGFF 160
                            ******986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MRQNCASNEF VEDEKLSADV NVEENEEVSS PYFFTSTSML IKPVVVKTLV PVEGTLFDSV  60
EEAYKAYKDC VVEAGFIVRR GHQTNDGGIV INKEFLCNKE GNKKVKVKEF DSLKDNCDAK  120
AVKRIRSEFS TNCKAKIYVV RSGEKYRVKS FVEEHNHGFF TAEDRHLQKS HRSMSLAHQY  180
FAIKASNLNI GPCMSFNFIA ELLGGYENVG ATKIDFKNMS RDIYSYIGKY DAQMIIDKFS  240
ILKERDENFT FEFKTNTDGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-11FAR1 family protein