PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc022750.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 317aa MW: 35745.7 Da PI: 9.1012

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc022750.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	41.3	4.9e-13	77	170	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfv....Cske.gkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +Y +YA+e+GF +rks++k+ r+g ++++ C k+ ++ kk +k+ rt++ tgCka+ + +++ + k+++t+++ Cse_sc022750.1_g010.1 77 MYMRYASEAGFGIRKSTQKRL-RDGFRAVNELNvqegCPKKiRLNTLAPKKGDKQVRTSNFRITGCKARAVFHMMPgSRKYRLTTFDV 163 8*************99998.4443333344301114333144455555588999999999**********9******* PP FAR1 84 eHnHela 90 eHnHel Cse_sc022750.1_g010.1 164 EHNHELD 170 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MTPLTTNTTL SSRVIRMKKS DSIGADTSSG LKTPSPFIHH DFIDTPGGSV FWVPRVAASV 60 LPVLFCVYDS VEDCISMYMR YASEAGFGIR KSTQKRLRDG FRAVNELNVQ EGCPKKIRLN 120 TLAPKKGDKQ VRTSNFRITG CKARAVFHMM PGSRKYRLTT FDVEHNHELD RVEYKHLSKS 180 ERKLTYTEQL FIIKVSNYNI GATRAHRDSD AQMLINRMED RMKFTSDFSF DYLVENAELI 240 GLFWADQVAK LNYKEFGDIV SFDATYKTNN ICGSTEHNMV TCPDKGKYLT NNAEVGGSSA 300 KGVLVQVEVE SSAQPLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	1e-08	FAR1 family protein