PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc022605.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 256aa MW: 28582.7 Da PI: 8.2121 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 51.8 | 1.4e-16 | 102 | 147 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn E+rRR+riN+++ L++l+P++ K +Ka++L +A+eY+k+Lq Cse_sc022605.1_g020.1 102 HNLSEKRRRSRINEKLKALQTLVPNS-----NKTDKASMLDEAIEYLKQLQ 147 9************************7.....5******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MADLYGNDHR SFSSSSSLES EDMSSFLQTF ISNNNNGSSA SNKYGGPLIP SPVPEFHDSD 60 IRFSDLSSFY SPEPNQVQKV SDVLQSSNPT RPSKRTRAAE IHNLSEKRRR SRINEKLKAL 120 QTLVPNSNKT DKASMLDEAI EYLKQLQLKV QTLAMRNGFG LQPVFSQEQE MQRGICYEEG 180 YKFVSPCDGA AGTSSQNQGF SMRREFGMPN HQIGMMMKPN PVFGSELTNE NQYGFNNHST 240 SMKDTNRSFS GKGVSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36930.1 | 1e-33 | bHLH family protein |