PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc022602.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 366aa MW: 42468 Da PI: 7.1783

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc022602.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.6	1.2e-19	57	157	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...........tekerrtraetrtgCkaklkvkkek.dgkw 76 k+Y++YA+++GFsvr s++++ ++g + ++ +vC+keg ++e k +e++ rt++ +rtgC a++k k++ + k+ Cse_sc022602.1_g010.1 57 KMYENYAEKAGFSVRLSTQNTL-KSGIVERKYLVCNKEGLPKEGLPKgvnkdtmseetSETQIRTSSISRTGCMARVKFKLNAnHTKY 143 68*************99998.7888************9988889999999988888899***************999* PP FAR1 77 evtkleleHnHela 90 e++++e++HnH++ Cse_sc022602.1_g010.1 144 ELYDFEENHNHTFI 157 ***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MKLNFFFEGI HYIKQDDSDI CEEIEVEGGD FHYKPIVDES EKPKIGREYT TIEECIKMYE 60 NYAEKAGFSV RLSTQNTLKS GIVERKYLVC NKEGLPKEGL PKGVNKDTMS EETSETQIRT 120 SSISRTGCMA RVKFKLNANH TKYELYDFEE NHNHTFIPVV YRNLSKKRKK MSHKQQIYMQ 180 QLGGTNIGAT RAHHLYAATN GGYDSVDATK TEFRNNKRDL NNHIGDSDAQ MLITKMENRK 240 KHVANFSFEY AVEDSQLTAL FWADEMAKYN YIEFGDTISF DATFRTNKHK QEVLDDQTIQ 300 KVPRYKTKLA IERHAAKIYT RTIFLLIQDE INSAVYDCHQ VSEVIEDGIE VLTIKEIREI 360 IPRKSK

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MKLNFFFEGI HYIKQDDSDI CEEIEVEGGD FHYKPIVDES EKPKIGREYT TIEECIKMYE  60
NYAEKAGFSV RLSTQNTLKS GIVERKYLVC NKEGLPKEGL PKGVNKDTMS EETSETQIRT  120
SSISRTGCMA RVKFKLNANH TKYELYDFEE NHNHTFIPVV YRNLSKKRKK MSHKQQIYMQ  180
QLGGTNIGAT RAHHLYAATN GGYDSVDATK TEFRNNKRDL NNHIGDSDAQ MLITKMENRK  240
KHVANFSFEY AVEDSQLTAL FWADEMAKYN YIEFGDTISF DATFRTNKHK QEVLDDQTIQ  300
KVPRYKTKLA IERHAAKIYT RTIFLLIQDE INSAVYDCHQ VSEVIEDGIE VLTIKEIREI  360
IPRKSK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	166	170	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-22	FAR1 family protein