PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc022554.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 692aa MW: 78363.2 Da PI: 6.4602

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc022554.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	37.3	5.2e-12	552	595	3	46
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 +++++e ++++ +pi +AA + gv+ ++ Kr CR+ GI WP Cse_sc022554.1_g020.1 552 DSLTMEAVEQHVGKPISQAAESFGVSRSTFKRFCREKGILSWPK 595 689****************************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MELFGQCQSV DSADREKSPC SGSRTVLYTD QNRDLLWNKV SLEPPAVSFS GESRYLTPLW 60 VSRNEEPLNE LYRAEIVPRI TAVLKQLVLR EQHVLVQFWS PCVVGKHQLL TTLDQPFGLG 120 LPVEELCFYR KESERNLFLV YKDDEEQDIS PPARVFRRGL PEWTFDLTNY SPKHFSQQDT 180 AIHCNLHGYL ALPIFDSTTA LCIGVLEILM SSKNTDYTFE VQQVHKALKI QNLTCPQIFD 240 SATPKVPNEC KQKTWDKIFS ILKTVCDVHN LPLAQTWAVS PFTSFVSYDK NIRKSCSSFD 300 TKCLGKACMS TTALPFHVRD MGMWSFREAC KMKHLDRFRS FVGRTMLAHG SSYCEDVTQL 360 CEEEYPLVHN ARMSGLTSCF TIFLHSIEGD NDDYVLEFFL PLNSKDSIHV LNLVQTLKQI 420 IVVASGFELG EISPIQITGS PRDETCLSVS IELQSIQISS TTTAKSLAFG MDITDSESVL 480 ANVVKTDSAD DQSQCSSKEN YTNDMSDNVN IVNSRENNNA VSYSIVTNQK SSDTITDAGE 540 KHIKRGRKRK IDSLTMEAVE QHVGKPISQA AESFGVSRST FKRFCREKGI LSWPKSCQSK 600 KTSHATEVAQ LMVKATFKGD MIKFRFPISS GLLELENEVA QRLDLKGKRL IIKYKNEEND 660 RLRITCDDDL HNLPEFLATN TTIKLLVELP WN

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MELFGQCQSV DSADREKSPC SGSRTVLYTD QNRDLLWNKV SLEPPAVSFS GESRYLTPLW  60
VSRNEEPLNE LYRAEIVPRI TAVLKQLVLR EQHVLVQFWS PCVVGKHQLL TTLDQPFGLG  120
LPVEELCFYR KESERNLFLV YKDDEEQDIS PPARVFRRGL PEWTFDLTNY SPKHFSQQDT  180
AIHCNLHGYL ALPIFDSTTA LCIGVLEILM SSKNTDYTFE VQQVHKALKI QNLTCPQIFD  240
SATPKVPNEC KQKTWDKIFS ILKTVCDVHN LPLAQTWAVS PFTSFVSYDK NIRKSCSSFD  300
TKCLGKACMS TTALPFHVRD MGMWSFREAC KMKHLDRFRS FVGRTMLAHG SSYCEDVTQL  360
CEEEYPLVHN ARMSGLTSCF TIFLHSIEGD NDDYVLEFFL PLNSKDSIHV LNLVQTLKQI  420
IVVASGFELG EISPIQITGS PRDETCLSVS IELQSIQISS TTTAKSLAFG MDITDSESVL  480
ANVVKTDSAD DQSQCSSKEN YTNDMSDNVN IVNSRENNNA VSYSIVTNQK SSDTITDAGE  540
KHIKRGRKRK IDSLTMEAVE QHVGKPISQA AESFGVSRST FKRFCREKGI LSWPKSCQSK  600
KTSHATEVAQ LMVKATFKGD MIKFRFPISS GLLELENEVA QRLDLKGKRL IIKYKNEEND  660
RLRITCDDDL HNLPEFLATN TTIKLLVELP WN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	6e-88	Nin-like family protein