PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc022349.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 274aa MW: 31938.9 Da PI: 8.3028 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.8 | 5.2e-18 | 21 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed ll+++v+ +G g+W++ a+ g++Rt+k+c++rw++yl Cse_sc022349.1_g030.1 21 RGPWTLDEDNLLIQYVTCHGEGRWNSLAKSSGLKRTGKSCRLRWLNYL 68 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.9 | 3.2e-15 | 75 | 117 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+ +++E++l+++++ ++G++ W++Ia+ ++ gRt++++k++w++ Cse_sc022349.1_g030.1 75 GNLSPQEQLLILELHSKWGNR-WSKIAQQLP-GRTDNEIKNYWRT 117 6779*****************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MRVSKKISSS CHEQEVGELR RGPWTLDEDN LLIQYVTCHG EGRWNSLAKS SGLKRTGKSC 60 RLRWLNYLKP DVKHGNLSPQ EQLLILELHS KWGNRWSKIA QQLPGRTDNE IKNYWRTKVQ 120 KQARYLKIDS NSKKFVEALK QFWLPRLLEK VEQSSPSSSS TSTTTMDAYQ KNLSHQALSN 180 ETLMENTYSS SSICSLNSTK IVLPYLPESS IQSNGYFVDN NNFDAMSFNH LNMQESRYSD 240 MSTLDFQLAE VDWMNNELVD DTFWNMDELW QFRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 2e-84 | MYB family protein |