PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc022170.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 670aa MW: 77767.5 Da PI: 7.762

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc022170.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.3	1.7e-20	60	143	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 ++Yn YA+e GF+vr+++s +++++e + + ++Cs +g+++ ++ + + r+etrtgC a++++++ ++ +w++ ++ +HnH Cse_sc022170.1_g010.1 60 NYYNCYARESGFKVRVKNSWFKRNSKEKYGAVLCCSSQGFKRVKDMN-----HLRKETRTGCPAMVRMRLVDSRRWRILEVTVDHNHL 142 69***************************************9998.....999******************************8 PP FAR1 89 l 89 l Cse_sc022170.1_g010.1 143 L 143 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 670 aa Download sequence
MEEVSLDGNH VNGDEGGENN LQEREEKAEV DIENGFRDGE KDFMEPAVGM EFESYDDAYN 60 YYNCYARESG FKVRVKNSWF KRNSKEKYGA VLCCSSQGFK RVKDMNHLRK ETRTGCPAMV 120 RMRLVDSRRW RILEVTVDHN HLLGAKAYKS IKKISPRGTK KTLQSDYDTD GRTVKLYRAL 180 VIDSGGNNGN VSSSRGELGS SSDHRPDQLN LKKGDVQAIY NYFCRMQLTN PNFFYLMDLN 240 DEGHFRNMIW LDARCRAAIG YFSDVIYFDT TYLCNKYEIP LVMFVGMNHH CQSVLLGCGL 300 LSGETRESYL WVLKAWLTST SGRTPQTVIT DRCKILQTVV SEVFPKSHHR FSLSHIMKKV 360 PEKLGGLRNY DAIRKVLVKV AYETLKPFDF ENSWAFMIQR FGISEHEWLR SLYEDRAWWA 420 LVYLKDTTFA GMAAASQPSD TLHPIFDKYI HKQTPLKEFL DKYELVLQKK HKEESAADVE 480 SRNSMPTLKT RCSFELQLSK VYTQEIFKKF QVEVEEMYSC FSTTQLHVDG PVIIFLVKER 540 VLVDGNRREI KDYEVLYNRA AADVRCICSC FNFKGYLCRH ALCVLNHNGV EEIPSKYILS 600 RWKRDYKRLY VPDHDGSNID GTDTVQWFNQ LYRSALQVVE EGVISLDHYK VALQTFEECL 660 NRAHNIEDKT

Sequence ? help Back to Top

Protein Sequence Length: 670 aa Download sequence

MEEVSLDGNH VNGDEGGENN LQEREEKAEV DIENGFRDGE KDFMEPAVGM EFESYDDAYN  60
YYNCYARESG FKVRVKNSWF KRNSKEKYGA VLCCSSQGFK RVKDMNHLRK ETRTGCPAMV  120
RMRLVDSRRW RILEVTVDHN HLLGAKAYKS IKKISPRGTK KTLQSDYDTD GRTVKLYRAL  180
VIDSGGNNGN VSSSRGELGS SSDHRPDQLN LKKGDVQAIY NYFCRMQLTN PNFFYLMDLN  240
DEGHFRNMIW LDARCRAAIG YFSDVIYFDT TYLCNKYEIP LVMFVGMNHH CQSVLLGCGL  300
LSGETRESYL WVLKAWLTST SGRTPQTVIT DRCKILQTVV SEVFPKSHHR FSLSHIMKKV  360
PEKLGGLRNY DAIRKVLVKV AYETLKPFDF ENSWAFMIQR FGISEHEWLR SLYEDRAWWA  420
LVYLKDTTFA GMAAASQPSD TLHPIFDKYI HKQTPLKEFL DKYELVLQKK HKEESAADVE  480
SRNSMPTLKT RCSFELQLSK VYTQEIFKKF QVEVEEMYSC FSTTQLHVDG PVIIFLVKER  540
VLVDGNRREI KDYEVLYNRA AADVRCICSC FNFKGYLCRH ALCVLNHNGV EEIPSKYILS  600
RWKRDYKRLY VPDHDGSNID GTDTVQWFNQ LYRSALQVVE EGVISLDHYK VALQTFEECL  660
NRAHNIEDKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein