PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021962.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 334aa MW: 37501.6 Da PI: 6.8526

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021962.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.7e-12	152	199	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h +Er+RR+++ +f L llP+ kK++Ka++Le A +YIk+Lq Cse_sc021962.1_g020.1 152 QEHVLAERKRREKLTRRFISLSALLPEV-----KKMDKATVLEDASKYIKYLQ 199 67999********************8.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MDIPFGAWLP DQLEMEDPCH FINQHQHIYP YSELVDSFSS QGFKGCMNLV TRSEAIHAAT 60 ISKELDSQEI YKATRNNSFT PIGGSSSNTF TISFGDHSSS QGINQNTLPG GFKLKYDDVM 120 QPKLEMSLNE LLGSIELPKR VSTTRRNRRQ AQEHVLAERK RREKLTRRFI SLSALLPEVK 180 KMDKATVLED ASKYIKYLQN RVKELEETSV SGKNVIQESK TSMRSKFHGD HEDNASSFDD 240 TNSLPISTAN DLGIKVKISG SHTLVRIYCQ LNSSLALRAI IEMESLHFSI MCNNVLPISG 300 NTALITIIAQ MSEEIEMTAM NLVNCLQSSL SNFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	145	184	RRNRRQAQEHVLAERKRREKLTRRFISLSALLPEVKKMDK
2	158	163	ERKRRE
3	159	164	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-39	bHLH family protein