PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021961.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 354aa    MW: 38695.6 Da    PI: 8.5637
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021961.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.00035287309123
                            EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                            ++C++C+k Fs+   L  H r+H
  Cse_sc021961.1_g030.1 287 HRCNICSKIFSSGQALGGHKRRH 309
                            79*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MYNNINNMIF MGHVATNTTP ATTSSDLQLC PTSPDPHDIF RRTVKTSDVS VGSIQPISAI  60
RPHHANPRKK RTQMIRFHNS NSSGNSKAIV GVGASGSYSG GHTGVVAKKK PDPNAPKITR  120
PCTECGKRFW SLKALFGHMR CHPERPWRGI NPPPNMNLHH ARLEHDDVTA RVATEEDEYV  180
AGCLLMLAKA PTILASSSYQ QHHHSGSLET LAIQMCDTES RFECSSCKKV FGSHQALGGH  240
RASHKNVKGC FAITRNDGGG PIEELEEGEF ISRYDRIGEV SSSSQQHRCN ICSKIFSSGQ  300
ALGGHKRRHW EKDEGVVPIA VSSPFKFDLN VPASVQDDPG PTCTSADLDL RLGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.12e-73C2H2 family protein