PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021919.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 248aa MW: 26846.2 Da PI: 7.813

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021919.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.9	6.4e-20	5	50	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l ++v+++G+++W+++++t++ gR++k+c++rw + Cse_sc021919.1_g020.1 5 KGPWSPEEDQMLQQLVEKHGPRNWSLVSKTIP-GRSGKSCRLRWCNQ 50 79****************************.*********985 PP
2	Myb_DNA-binding	53	8e-17	59	101	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T eEde +++a++++G++ W+tIar + gRt++ +k++w++ Cse_sc021919.1_g020.1 59 AFTLEEDETILRAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 101 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MDRIKGPWSP EEDQMLQQLV EKHGPRNWSL VSKTIPGRSG KSCRLRWCNQ LSPQVEHRAF 60 TLEEDETILR AHARFGNKWA TIARLLSGRT DNAIKNHWNS TLKRKCCSMT NEEFNDFAIQ 120 QPLLKRSVSD GTGLPVSGFC FNPGSPSGSD VSDSSARTSS SSYVYTAAAR TAAAAIVDDP 180 PTSLTLSLPG AESSEASSAA VTVPAPPPAV AAPPAFDAEF LAVMQEMIRM EVRNYISGDG 240 FRVGGCGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	4e-73	MYB family protein