PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021821.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 315aa MW: 35686.4 Da PI: 8.9794

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021821.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.6	2.4e-17	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++lv ++k++G gtW+t + + g+ R++k+c++rw +yl Cse_sc021821.1_g040.1 13 KGSWTSEEDQKLVTYIKEHGHGTWRTLPLKAGLQRCGKSCRLRWTNYL 60 799*******************************************97 PP
2	Myb_DNA-binding	56.4	6.9e-18	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W+tIar+++ +Rt++++k++w+++l Cse_sc021821.1_g040.1 66 RGKFSLQEEQTIIQLHALLGNR-WSTIARHLP-KRTDNEIKNYWNTHL 111 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MGRSSIFVKG LNKGSWTSEE DQKLVTYIKE HGHGTWRTLP LKAGLQRCGK SCRLRWTNYL 60 SPNIKRGKFS LQEEQTIIQL HALLGNRWST IARHLPKRTD NEIKNYWNTH LKKRLTKMGI 120 DPITHKSKTG ANTNVSHLTQ WENVRLEAEA RSARGGKVVS DCYNQRIDLT NIINKSSMSS 180 ILVPQPLCFD VLKGWQGINS CKLSSGLATL NDQTMPIVNV VESVEPQALE GMTTEYHMND 240 WKTSTEFFNT IENPNNTLEV SDMIFKENYL AEASINHLVN GASNGNCHGD FEDNISYWRK 300 ILENLGHGSS FSSVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	1e-83	MYB family protein