PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021681.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 304aa    MW: 33572.6 Da    PI: 6.6517
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021681.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.11.2e-18225259135
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                            Cs+Cg+ kTp+WR gp g ktLCnaCG+++++ +l
  Cse_sc021681.1_g010.1 225 CSHCGVQKTPQWRTGPLGAKTLCNACGVRFKSGRL 259
                            *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MECVQGALKN SFIPNNNYQQ HSLSDEFSPV NVLPSDDFFV DGLLDFSDDG DFEEEKEETN  60
VVCDTVSDKP ISVTPVVTDN NDCFTIPVDD VADLEWVSQF VDDSFSGGYS LTCPAGKFPE  120
RKPEPKPEPE TGLVVKPSFT TPVQTKARSK RFRTGGRVWS LGSNALTEST TSSSSSSSCT  180
SNPWLFLHDS LSNQTAESFL GKKPVKRLKR KTLTGPVEPV QPRRCSHCGV QKTPQWRTGP  240
LGAKTLCNAC GVRFKSGRLL PEYRPACSPT FSSEVHSNNH RKVLEMRMKK EAVQPGLTQP  300
VQSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.21e-56GATA family protein