PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021569.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 398aa MW: 45731.9 Da PI: 9.2521

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021569.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.2	1.4e-16	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +lv +++++G g+W++ + + g+ R++k+c++rw +yl Cse_sc021569.1_g020.1 13 KGPWTSEEDRKLVAYIEEHGHGSWRALPLKAGLQRCGKSCRLRWTNYL 60 79********************************************97 PP
2	Myb_DNA-binding	53.7	4.9e-17	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l Cse_sc021569.1_g020.1 66 RGKFSSQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 111 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MGRSPSFVKG LKKGPWTSEE DRKLVAYIEE HGHGSWRALP LKAGLQRCGK SCRLRWTNYL 60 RPDIKRGKFS SQEEQTIIQL HALLGNRWSA IATHLPKRTD NEIKNYWNTH LKKRLTKMGI 120 DPITHKSKTS VNANVSHMTQ WENARLEAEA RLVRGSRVVS NFYQRIHNGL APDYINKSSM 180 SSLSVPQPLC FDVLKAWQGN GLETLNNQTM PIMNVLESVE PQTLKDMSTE YHMNEPSKDS 240 FNTFDNTKEE ATQHTLEVRE MIYQDNYLGE AFTNHLVNDA NCHGHFEDDS NYWSNMLDKL 300 GNKANLHMDE TREKSPPTDV EPPVFTPAYF CCNPKQALEK RKRKLQTNMT MIFPPSIPIK 360 IKFTPASAPR MRQTNDIFIK ELTSWENISK QGLVSEAP

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MGRSPSFVKG LKKGPWTSEE DRKLVAYIEE HGHGSWRALP LKAGLQRCGK SCRLRWTNYL  60
RPDIKRGKFS SQEEQTIIQL HALLGNRWSA IATHLPKRTD NEIKNYWNTH LKKRLTKMGI  120
DPITHKSKTS VNANVSHMTQ WENARLEAEA RLVRGSRVVS NFYQRIHNGL APDYINKSSM  180
SSLSVPQPLC FDVLKAWQGN GLETLNNQTM PIMNVLESVE PQTLKDMSTE YHMNEPSKDS  240
FNTFDNTKEE ATQHTLEVRE MIYQDNYLGE AFTNHLVNDA NCHGHFEDDS NYWSNMLDKL  300
GNKANLHMDE TREKSPPTDV EPPVFTPAYF CCNPKQALEK RKRKLQTNMT MIFPPSIPIK  360
IKFTPASAPR MRQTNDIFIK ELTSWENISK QGLVSEAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	7e-92	MYB family protein