PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021527.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 489aa    MW: 54449.4 Da    PI: 5.9139
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021527.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3281.8e-1001104841374
                   GRAS   1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfs 85 
                            lv+lL+++Aea++ ++ +  la+ +L rl+ l+sp+  ++m+Rlaayft AL + l r + +     +  +  +++ s++laa++l++
  Cse_sc021527.1_g020.1 110 LVHLLMAAAEAMTGDNINhdLATVILVRLKSLVSPNEgTNMERLAAYFTDALLNLLERGGGGGGLHYKQHHYLHHHRSDVLAAFQLLQ 197
                            68***********98877669***********888766********************55554444444444456699********** PP

                   GRAS  86 evsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfA 169
                            ++sP++kf+h+taNqaI e+v +e+rvHiiD+di++G+QW++L+qaL sR++gpp  +lRiT++++p sg  s  +++etg+rL+ fA
  Cse_sc021527.1_g020.1 198 DMSPYVKFGHFTANQAIIESVTHERRVHIIDYDIMEGIQWASLMQALISRKDGPPtpHLRITALSRPGSGrkSISTVQETGRRLTAFA 285
                            ***************************************************776556**********99999999************* PP

                   GRAS 170 eelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerf 257
                            +++g pf+f+    ++ e++++++L++ +gEa+++n++l+l ++  +s ++     ++L+  k+l+Pk+v++ve+e    ++ F+ rf
  Cse_sc021527.1_g020.1 286 ASIGQPFSFHQCKLDSDETFKPSSLKLVRGEAIIINCMLHLPHFSYRSPTSVA---SFLSGSKTLNPKLVTLVEEEGPKAEGGFVGRF 370
                            ***********9999*****************************977777776...9******************************* PP

                   GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerlee.aGFkpvplsekaakqaklllrkv 344
                            +++l+++sal+dslea++p + ++r+ vEr++lg++i   +a   ++    + + ++W ++l++ + F+pv++s  + +qaklll  +
  Cse_sc021527.1_g020.1 371 MDTLHHFSALYDSLEAGFPMQGRARALVERVFLGPRILGSLARVYRD----EGECGSWGDWLSSsSEFHPVNISFANHCQAKLLLGLF 454
                            *********************************************99....777999**99987589********************* PP

                   GRAS 345 ksdgyrve.eesgslvlgWkdrpLvsvSaWr 374
                            + dgyr e + s+ l+lgWk+r+L+s+S W+
  Cse_sc021527.1_g020.1 455 H-DGYRAEeCASNKLLLGWKSRRLLSASIWT 484
                            *.*****945699*****************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    
MVVNMMPELD LSDFTTTTTT TTSTTNSTTT PEEDQCRNWG DWSPVVDWDA FSVHPHVNFH  60
DLFEPEMEED TDKTTFSYSD DDQNLVASPD AMMIEAAVDS QSEDVKGLRL VHLLMAAAEA  120
MTGDNINHDL ATVILVRLKS LVSPNEGTNM ERLAAYFTDA LLNLLERGGG GGGLHYKQHH  180
YLHHHRSDVL AAFQLLQDMS PYVKFGHFTA NQAIIESVTH ERRVHIIDYD IMEGIQWASL  240
MQALISRKDG PPTPHLRITA LSRPGSGRKS ISTVQETGRR LTAFAASIGQ PFSFHQCKLD  300
SDETFKPSSL KLVRGEAIII NCMLHLPHFS YRSPTSVASF LSGSKTLNPK LVTLVEEEGP  360
KAEGGFVGRF MDTLHHFSAL YDSLEAGFPM QGRARALVER VFLGPRILGS LARVYRDEGE  420
CGSWGDWLSS SSEFHPVNIS FANHCQAKLL LGLFHDGYRA EECASNKLLL GWKSRRLLSA  480
SIWTYSNSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-155GRAS family protein