PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021416.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 304aa    MW: 34335.1 Da    PI: 4.751
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021416.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.93e-07165184626
                            -SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                            C+ f++ G+C+ Gd C FaHg
  Cse_sc021416.1_g010.1 165 CPEFRE-GICRKGDLCEFAHG 184
                            9*****.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
LAANNDIEGF TELIDHDPTS VDQVGQWYVL GKGSTQVVPE NRAPLMVTSN VLSISRTDVN  60
RSIGVDAVKL LLAKRADPNM IDANALRPVD MIADSPKLLE LQNALHELLK LNDVLHRKMA  120
RKYTDEFMMY SFKVMQCSRV RLIMVKTHAE AETHTYIAIL VCHACPEFRE GICRKGDLCE  180
FAHGILECWL LPVKNWATEC PELRSLILRE SGSNSVGLWS EWGSSSGELD WSVNKEEPKF  240
SFFQSPLEET PHVVEGAVYD DDGSSLKNEL EQMGQSTFLA WTEQMQLHLV WLNKKVEDDS  300
IQVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40140.22e-24C3H family protein