PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc021231.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 202aa MW: 22876.9 Da PI: 9.7464 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 37.3 | 8.8e-12 | 86 | 140 | 47 | 90 |
FAR1 47 k...........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + ++ +rr+ra++r+gCka l+++++ ++k++v+++ ++HnH+l+ Cse_sc021231.1_g030.1 86 TdtpssdivevvKVIKRRKRASQRCGCKALLRLRQTPENKYVVYTFLEKHNHNLV 140 1456667777777889*************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MSNSFEDDSM QGEPSTPGST NIVQDNVVDA ESVTQVGSYQ PTPPAKNKPM EGTQFDTIEQ 60 ALKFYKEEGV KPLPKNDISK KDKSKTDTPS SDIVEVVKVI KRRKRASQRC GCKALLRLRQ 120 TPENKYVVYT FLEKHNHNLV HENDYKYLQA ARKLTFSKQH LLRQLSNANI GPTRAWKVMK 180 EMYGGFENIG VQHGVGSFYG HI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-09 | FAR1 family protein |