PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021161.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 628aa    MW: 70358 Da    PI: 6.078
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021161.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS387.71.3e-1182306051373
                   GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsev 87 
                            l++lLl+c ea+  ++  ++++++++l elasp+g +++ Rla+y+teALa r++r +++++++  p+e + + ++e+ +al+l+++ 
  Cse_sc021161.1_g010.1 230 LISLLLACLEAIGMKNIPAVNHFISKLGELASPRGeSSISRLASYYTEALALRVSRIWPNIFQISIPREVN-QMEEENGTALRLLNQS 316
                            5799*******************************889************************999999998.5677888999****** PP

                   GRAS  88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvp 175
                            +Pi+kf h+t N+ +l+a+eg+++vHiiDfdi+qGlQWp+++q+LasR+++p ++RiTgvg+    sk+ l etg rL+ fAe+l+++
  Cse_sc021161.1_g010.1 317 TPIPKFIHFTSNEILLRAFEGKDKVHIIDFDIKQGLQWPSFFQSLASRNSPPSHIRITGVGE----SKQDLIETGARLSGFAEALNLE 400
                            **************************************************************....9********************* PP

                   GRAS 176 fefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealey 263
                            +ef++ v++rled++l++L+vk+gE++aVn+ lqlh++l + +  +   +++  l++s++P +vvv+eqea+hn+  + +r++++l y
  Cse_sc021161.1_g010.1 401 LEFHP-VVDRLEDVRLWMLHVKEGETVAVNCLLQLHKMLYDGTGGA--LRDFFGLIRSTNPSIVVVAEQEAEHNDMVLEKRVSNSLMY 485
                            *****.7********************************6655444..489************************************* PP

                   GRAS 264 ysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerlee.aGFkpvplsekaakqaklllrkvk.sdg. 348
                            ysa+fd++++  p +++ r k+E+  +grei+n++aceg er erh  +++W + ++e  GF++v+++e++  q +++lr+++   g 
  Cse_sc021161.1_g010.1 486 YSAIFDCIDTVHPLQNQSRFKIEES-FGREIRNIIACEGLERYERHVGFNQWWKSMQElGGFRNVEINEREFFQSQMILRMYQhPFGp 572
                            *************************.**************************999998568*********************965556 PP

                   GRAS 349 ..yrveee......sgslvlgWkdrpLvsvSaW 373
                              ++ve++       + ++l+W+d+pL++vSaW
  Cse_sc021161.1_g010.1 573 nsFKVEKKqsnggvTAGITLTWSDQPLYTVSAW 605
                            679**98877666667788************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 628 aa     Download sequence    
MTKGFGMLAG YTKPSAQFQA CHFPSMSTQR LDLPCNNTTN FPRKDSTRSQ PVRPVGSLSV  60
DNNPIEARTS SCSLKHNVVE KRSDIWDNSS NKGLKRLYED DQDESFRAKR KRGCSKVEEF  120
GENEETLSLG QLGGGNFWHP VTSIPFSSPW SFVNELADLG EKGVASSSHR QQVVKETSSG  180
SGSRSSSPES HQSLDLEGGL NGVGAPNPNQ SLELFAVGNE SHDEEVGFEL ISLLLACLEA  240
IGMKNIPAVN HFISKLGELA SPRGESSISR LASYYTEALA LRVSRIWPNI FQISIPREVN  300
QMEEENGTAL RLLNQSTPIP KFIHFTSNEI LLRAFEGKDK VHIIDFDIKQ GLQWPSFFQS  360
LASRNSPPSH IRITGVGESK QDLIETGARL SGFAEALNLE LEFHPVVDRL EDVRLWMLHV  420
KEGETVAVNC LLQLHKMLYD GTGGALRDFF GLIRSTNPSI VVVAEQEAEH NDMVLEKRVS  480
NSLMYYSAIF DCIDTVHPLQ NQSRFKIEES FGREIRNIIA CEGLERYERH VGFNQWWKSM  540
QELGGFRNVE INEREFFQSQ MILRMYQHPF GPNSFKVEKK QSNGGVTAGI TLTWSDQPLY  600
TVSAWVPGDM AGTSGSYQQQ QQQQQRQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein