PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021128.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 543aa    MW: 61213 Da    PI: 6.8582
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021128.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS358.69.2e-1101725421374
                   GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs..elykalppsetseknsseelaalklfse 86 
                            lv+lL++cAeav+ +d+++ ++lLa+l+  a   g+++qR+a++f+++L  rl+   +   +    p+++ ++   +++  al+l +e
  Cse_sc021128.1_g040.1 172 LVQLLVSCAEAVACRDKTQSSKLLAELRGDALVFGSSFQRVASCFVQGLTDRLLLVHPlgAVGLVAPARNLNPIALDKKEEALRLVYE 259
                            689*************************************************9983331133333466666666699999******** PP

                   GRAS  87 vsPilkfshltaNqaIleavegeervHiiDfdi....sqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAe 170
                            ++P +kf+h++aN +Ilea+ege+ vH++D+++    +qG QW aL+q+Las+++ p +lRiT+vg+    s +e   +g  L+ +A 
  Cse_sc021128.1_g040.1 260 TCPHIKFGHFIANLTILEAFEGENYVHVVDLGMtlglQQGHQWRALIQSLASQTHTPRRLRITAVGP----SVNEFAIIGIELEAYAL 343
                            ******************************875222268999*************************....9**************** PP

                   GRAS 171 elgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfl 258
                            e g+++ef++ v+++le+l++e++++ ++E+l++n++lqlh +++es    +   +vLk++ +lsPkv+++veq+++hn++ Fl rf+
  Cse_sc021128.1_g040.1 344 ENGINLEFST-VESSLETLKPEDIKTYKHEVLVINSILQLHCVVKESRGALN---SVLKIIHELSPKVLTLVEQDSNHNGPFFLGRFM 427
                            **********.799******************************88877777...8******************************** PP

                   GRAS 259 ealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk. 345
                            eal+yysa+fd+l+a lp+ + +r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+ +p++   ++qak  l+k + 
  Cse_sc021128.1_g040.1 428 EALHYYSAIFDALDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPHRVERHERVDQWRRRMSRAGFQGAPIK--LVTQAKQWLAKLEv 513
                            **********************************************************************96..799**********9 PP

                   GRAS 346 sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                             +gy++ e++g+lvlgWk++p+v+vS+W+
  Cse_sc021128.1_g040.1 514 CEGYTIVEDKGCLVLGWKSKPIVAVSCWK 542
                            9***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MAPGYMINSL YNEQYFNRVN VGVNGIYPRS NTCGMKRKSD VFLDVGTNGF IKDDQENDDQ  60
SLSQDLSMSS YYPRRYLSVF DNPNSPWQLP GLLNKIKRTK SMPESSFNDH GLVDGENVGI  120
HRSNSMNSLP KPRFRDHVLT YTQRYLEAEA IEDAISDYGT LENEGTRDGM HLVQLLVSCA  180
EAVACRDKTQ SSKLLAELRG DALVFGSSFQ RVASCFVQGL TDRLLLVHPL GAVGLVAPAR  240
NLNPIALDKK EEALRLVYET CPHIKFGHFI ANLTILEAFE GENYVHVVDL GMTLGLQQGH  300
QWRALIQSLA SQTHTPRRLR ITAVGPSVNE FAIIGIELEA YALENGINLE FSTVESSLET  360
LKPEDIKTYK HEVLVINSIL QLHCVVKESR GALNSVLKII HELSPKVLTL VEQDSNHNGP  420
FFLGRFMEAL HYYSAIFDAL DAMLPKYDTK RAKIEQFYFA EEIKNIVSCE GPHRVERHER  480
VDQWRRRMSR AGFQGAPIKL VTQAKQWLAK LEVCEGYTIV EDKGCLVLGW KSKPIVAVSC  540
WKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-76GRAS family protein