PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021117.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 571aa MW: 66606.5 Da PI: 6.8664

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021117.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.8	5.3e-16	96	202	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkk 70 ++Y eYA+++ Fs+rks +k++ ng it++ C+k g ++++ k +++e+r+++ t t+Cka++k k+ Cse_sc021117.1_g010.1 96 NMYLEYAEKARFSIRKSITKRK--NGDITHKYILCNKAGLPRKTVVKdtlvdkqlnennqkedtkKTRENRNSNFTVTDCKACVKFKR 181 58************987776..999**********99988889*********98777788888999******** PP FAR1 71 ek.dgkwevtkleleHnHela 90 + + ++++++ ++HnH+l Cse_sc021117.1_g010.1 182 IHgTPAYRLYDFTENHNHPLL 202 999**************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MASTSEKNAS GVHTGTVPDE TQHGTPSHDV IQPVNVDDIG ISDEHDQYDR FDFEGSESDD 60 EVVPTPNGHK YWIPEVPFEE KPTECDVFDN FDEAYNMYLE YAEKARFSIR KSITKRKNGD 120 ITHKYILCNK AGLPRKTVVK DTLVDKQLNE NNQKEDTKKT RENRNSNFTV TDCKACVKFK 180 RIHGTPAYRL YDFTENHNHP LLDENNMDLS TAKRKLDFSD KLFIHRASLS NIGPTKAHWL 240 RVAFMGGYDK VRGKPSDWKN FRRSLNKYIG PSLRVYEQLF YFDRKKHVPN FTFEYHCVND 300 VLDRMFWADE TMKFNYHAFG DVVSFDATYR TNMYRMIFVP FKGIDHHQKC VTFGAALMSD 360 ETTESYEWIL TAFKQAHGKA PILVVTDQDA ALRKAVEAVL PESNHRLCMW HITQKLPGKI 420 CGELESDAEF KKMFHKLIWN VFIGPEEFEE HWHALIGMFN LTGNKWLSEM FEIRDRWIPS 480 YFKDLPMCCL MKTTSRSESS NSFFRIYSHS GNMMVQFMLC FEAAMDNRTF ESTPVMFTDL 540 PIERHACQVY SRSIFREVQK DILKGLYSCS L

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MASTSEKNAS GVHTGTVPDE TQHGTPSHDV IQPVNVDDIG ISDEHDQYDR FDFEGSESDD  60
EVVPTPNGHK YWIPEVPFEE KPTECDVFDN FDEAYNMYLE YAEKARFSIR KSITKRKNGD  120
ITHKYILCNK AGLPRKTVVK DTLVDKQLNE NNQKEDTKKT RENRNSNFTV TDCKACVKFK  180
RIHGTPAYRL YDFTENHNHP LLDENNMDLS TAKRKLDFSD KLFIHRASLS NIGPTKAHWL  240
RVAFMGGYDK VRGKPSDWKN FRRSLNKYIG PSLRVYEQLF YFDRKKHVPN FTFEYHCVND  300
VLDRMFWADE TMKFNYHAFG DVVSFDATYR TNMYRMIFVP FKGIDHHQKC VTFGAALMSD  360
ETTESYEWIL TAFKQAHGKA PILVVTDQDA ALRKAVEAVL PESNHRLCMW HITQKLPGKI  420
CGELESDAEF KKMFHKLIWN VFIGPEEFEE HWHALIGMFN LTGNKWLSEM FEIRDRWIPS  480
YFKDLPMCCL MKTTSRSESS NSFFRIYSHS GNMMVQFMLC FEAAMDNRTF ESTPVMFTDL  540
PIERHACQVY SRSIFREVQK DILKGLYSCS L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-61	FAR1 family protein