PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021106.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

DBB

Protein Properties

Length: 316aa MW: 35008.3 Da PI: 7.095

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021106.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.5	4.7e-07	4	42	5	37
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37 C+ ++++e++ +C ++ lC dC H+ H Cse_sc021106.1_g030.1 4 QCDVCNKNEASVYCAADEAALCTDCDHRVHHAnklagkH 42 7**************************997443555555 PP
2	zf-B_box	26.5	1.3e-08	55	93	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 ++++C+ ++ek+ lfC++++ lC+dC + +Hk Ht Cse_sc021106.1_g030.1 55 DAPICDICQEKKGFLFCQQDRAILCKDCDDGIHKVnqHT 93 5799*****************************656665 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MKIQCDVCNK NEASVYCAAD EAALCTDCDH RVHHANKLAG KHPRFSLHNP SSPKDAPICD 60 ICQEKKGFLF CQQDRAILCK DCDDGIHKVN QHTKNHNRFV LTGVKLSPTA TLYSNNNSPV 120 LDPTPIMKDV GIEKKKCQQD VNGSDHVSKK RQQEVNGSGH GSNTSSFSEY LIDMLPGWHV 180 EDFLDPIPNF SKVGDNDLAQ IWGDDIIDGN LNSSFSPELM GMWVPQAPTP PVAPSRYSHM 240 AQQVDPSLNN GFGDQIMNGS SLAFDPNSYN SVNKIASGIK AKKSSRKWPP DNDNFFMVPQ 300 ISPPSTTSKR LRTLWQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	2e-74	DBB family protein