PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021087.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 290aa    MW: 31968.1 Da    PI: 7.0069
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021087.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding63.44.6e-201156147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +g+W++eEd+ l ++v+++G+++W++I+r ++ gRt+k+c++rw + 
  Cse_sc021087.1_g010.1 11 KGPWSPEEDDMLQKLVQKHGPRNWSLISRSIP-GRTGKSCRLRWCNQ 56
                           79******************************.***********985 PP
2Myb_DNA-binding59.57.5e-1965107347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            ++++eEd+ +v+a++q+G++ W+tIar+++ gRt++ +k++w++ 
  Cse_sc021087.1_g010.1  65 PFSKEEDQMIVKAHAQYGNK-WATIARMLN-GRTDNAIKNHWNST 107
                            89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MTSMVDMDRI KGPWSPEEDD MLQKLVQKHG PRNWSLISRS IPGRTGKSCR LRWCNQLSPQ  60
VEHRPFSKEE DQMIVKAHAQ YGNKWATIAR MLNGRTDNAI KNHWNSTLKR KCSSMGNDDF  120
SFLDGHDLAN YQPPMKRAAS LEAGTSVCTR SDTGLFFDLN SPASSTEEPG IDICTTRSEA  180
MMSFNLNDPT SSVGSNLSDS SQIVTNDPLT SLSLSLPTDS PLPPQPPQVA AMQIGGANNG  240
FSKSELVAVM QEMIKSEVKN YVNGMMKNGQ CLQGEVAISN AVINRMGFNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.12e-78MYB family protein