PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc021065.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 419aa MW: 46564.1 Da PI: 5.7957

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc021065.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.8	3e-06	306	344	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L++A+eYIk L Cse_sc021065.1_g010.1 306 VRKEKMGDRITALQQLVSPF-----GKTDTASVLTEAIEYIKFL 344 5778999********998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MADSWWDSRT RPCLDSVSVS MNLFQETTTT TTTSGGGSDH GVVGNNPSLQ MMELGLSSQP 60 TSQSLDWNQA LYRGDQRNEH QHQSGYQTLI QDDHGLSSNT SNFQETQWKS HKMYSDSPSE 120 YKQINPRGFQ LEEPVHYNDE SGLNPSFQTL DHSYGSNSTV LQSLFGSDNN TNQDVADSCY 180 DQNQGISYNS YQSSYGGITM SGGGGGGEYP PQPPQEFPVN SPPKVQPPNI ATPLHFSNNA 240 RFWNASASSM NDVRSNFFPL QMQSTSSTIE DKPKNPISEI VKKTISKSSS TKRPRNENPP 300 LPAFKVRKEK MGDRITALQQ LVSPFGKTDT ASVLTEAIEY IKFLHEQVNV LSTPYMKNGA 360 APMQQQQQQQ QQISDKPLEG SRQDLRSRGL CLVPISSTFP VTHETTVDFW TPSFGGTFR

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MADSWWDSRT RPCLDSVSVS MNLFQETTTT TTTSGGGSDH GVVGNNPSLQ MMELGLSSQP  60
TSQSLDWNQA LYRGDQRNEH QHQSGYQTLI QDDHGLSSNT SNFQETQWKS HKMYSDSPSE  120
YKQINPRGFQ LEEPVHYNDE SGLNPSFQTL DHSYGSNSTV LQSLFGSDNN TNQDVADSCY  180
DQNQGISYNS YQSSYGGITM SGGGGGGEYP PQPPQEFPVN SPPKVQPPNI ATPLHFSNNA  240
RFWNASASSM NDVRSNFFPL QMQSTSSTIE DKPKNPISEI VKKTISKSSS TKRPRNENPP  300
LPAFKVRKEK MGDRITALQQ LVSPFGKTDT ASVLTEAIEY IKFLHEQVNV LSTPYMKNGA  360
APMQQQQQQQ QQISDKPLEG SRQDLRSRGL CLVPISSTFP VTHETTVDFW TPSFGGTFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	9e-57	bHLH family protein