PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc021041.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 185aa MW: 21361.1 Da PI: 9.6065 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 23.1 | 9.5e-08 | 15 | 47 | 12 | 44 |
HHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS SRF-TF 12 tfskRrngilKKAeELSvLCdaevaviifsstg 44 f R +g+ K +ELS+LC++ ++ i++s+++ Cse_sc021041.1_g010.1 15 CFKIRMEGMKKRLSELSTLCGIHASAIVYSPNN 47 577799999999******************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MKLTFMTNDS GIKYCFKIRM EGMKKRLSEL STLCGIHASA IVYSPNNPQP EVWPNSMGVY 60 NVLAQFLRTR VINWFRNMVT QEGYIQERIK KADKELKKQV KKNHKQETKK IIYHCLIGNT 120 PLDSLCMKNL NDLGLLVDQT LTEIDSRIEF LKKASTAQCY TLCSSKFMCF LSCGNLNKEV 180 FGLRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48670.1 | 1e-37 | M-type_MADS family protein |