PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020975.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 399aa MW: 46401.2 Da PI: 8.743

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020975.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.4	4.7e-08	35	116	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 A+++GF ++k ++k+ + + ++ ++ Cs++g +++e + ++ +r++++ +++C +l k k ++ w + HnH+++ Cse_sc020975.1_g040.1 35 AESIGFLIVKGRTKTDRSYK--YSIELLCSRKGISAREGLE-DELERQTSTAKINCPFRLLAKFIKrRNGWILRVKCPRHNHKFV 116 899******999986555..99**********999.8888899999*******99978899999889***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MQQQHQQTTM SGSPFVTQEM FDNEVALTDW VQSTAESIGF LIVKGRTKTD RSYKYSIELL 60 CSRKGISARE GLEDELERQT STAKINCPFR LLAKFIKRRN GWILRVKCPR HNHKFVDSFH 120 GFSQAMRLKE SEFVLVKQLT EQHVAPRIIL STIKESDPNN VSGIKTIYNA QDKIRRANRG 180 DLTSIQLLLV HLQRQGYTYY PRVNDHTNEL DEIFFVHPTS YALWTTYPEI MLMDSTYNTT 240 MFKLPFFTVV GVTPTNTTFS MAFSFLDKEK KPNFKWVLEC VKLVIQEQYY PRVIVTDRDL 300 ALLGACREEF PNANRLLCRW HINQNVLKHC RHRFDSVKEY ESVRWTWDLM VTAPNEDVFG 360 QITTCRIESQ HALLKLYLGS TQSSLDTLLC SVDKIIAAQ

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MQQQHQQTTM SGSPFVTQEM FDNEVALTDW VQSTAESIGF LIVKGRTKTD RSYKYSIELL  60
CSRKGISARE GLEDELERQT STAKINCPFR LLAKFIKRRN GWILRVKCPR HNHKFVDSFH  120
GFSQAMRLKE SEFVLVKQLT EQHVAPRIIL STIKESDPNN VSGIKTIYNA QDKIRRANRG  180
DLTSIQLLLV HLQRQGYTYY PRVNDHTNEL DEIFFVHPTS YALWTTYPEI MLMDSTYNTT  240
MFKLPFFTVV GVTPTNTTFS MAFSFLDKEK KPNFKWVLEC VKLVIQEQYY PRVIVTDRDL  300
ALLGACREEF PNANRLLCRW HINQNVLKHC RHRFDSVKEY ESVRWTWDLM VTAPNEDVFG  360
QITTCRIESQ HALLKLYLGS TQSSLDTLLC SVDKIIAAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-19	FAR1 family protein