PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc020886.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 264aa MW: 30439.2 Da PI: 8.3231 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.5 | 2e-15 | 10 | 57 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l+ +v+++G ++W+ Ia+ g++Rt+k+c++rw +yl Cse_sc020886.1_g020.1 10 KGPWTEHEDFQLLFYVHMFGDRRWDFIANVSGLKRTGKSCRLRWVNYL 57 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.5 | 2.3e-16 | 63 | 107 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+ E+ l ++++ ++G++ W++Iar+++ gRt++++k++w+++ Cse_sc020886.1_g020.1 63 RGKLTAHEERLVLELHSKFGNR-WSKIARRLP-GRTDNEIKNYWRTH 107 7999******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence |
MGQEDEMMRK GPWTEHEDFQ LLFYVHMFGD RRWDFIANVS GLKRTGKSCR LRWVNYLNPD 60 LKRGKLTAHE ERLVLELHSK FGNRWSKIAR RLPGRTDNEI KNYWRTHTRK EAQEKKRQSS 120 GSPSPSLSHC SSCSSVCNSH PIMGSLPLID KKERNFYDTG GVEMLTVIKG KNSSKKKNSE 180 KATSKVSNFK EGQEGHYSMD EIWKDIDLLD EDTIKPVFDP YSEIAPSLTW DNSLITSWTM 240 GSQEEFSIDS FPLTSQQFSS GLTD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46130.1 | 9e-74 | MYB family protein |