PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc020757.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | C2H2 | ||||||||
Protein Properties | Length: 259aa MW: 29321.8 Da PI: 9.9133 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 20.9 | 9.6e-07 | 45 | 67 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C+k F r nL++H rtH Cse_sc020757.1_g030.1 45 YVCDTCSKGFVREQNLQVHGRTH 67 9*********************9 PP | |||||||
2 | zf-C2H2 | 13.3 | 0.00025 | 120 | 142 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC C+k + +Lk H++ + Cse_sc020757.1_g030.1 120 HKCDTCSKAYAAEVDLKAHLKIC 142 79*******************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
ILIKNTQPKK KKTQKMASGS KSRKDPVRSD IVAVSPNTLL DARRYVCDTC SKGFVREQNL 60 QVHGRTHNLS FTLRKSSSNA PKKFLCPEPT CIYHNPSRAI GDMGGLKKHY LRKHSTEKNH 120 KCDTCSKAYA AEVDLKAHLK ICCSTSSYPP PFNMRHNPVQ VTINQNNSTL TTQSESPSVQ 180 TPFNSYPTIY HYEAQLHDFV AHQGSLMTNQ FMGSNSGQNF PTSFIPSTQQ NQHDFQNNFD 240 KEXVLYTATN GQQCPYRQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02080.1 | 9e-42 | C2H2 family protein |