PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc020634.1_g040.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 314aa    MW: 34882.1 Da    PI: 8.6392
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc020634.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1621.7e-1999184189
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                            +fY  Y+k++GF v k++s+ks +++e++  t  C++  k+ +++k+   + ++r+ t+t+C ak+      d+kw+++k++leHnH+
  Cse_sc020634.1_g040.1  99 DFYAIYGKKMGFGVYKRSSQKSLNDEETKYVTVACNRAQKSVSKSKN---SFNPRPITKTDCGAKVSAVVGADKKWHISKVSLEHNHP 183
                            6*************************************999999888...99***********************************9 PP

                   FAR1  89 l 89 
                            +
  Cse_sc020634.1_g040.1 184 F 184
                            8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MSRSSSLPSS SYESKESSYL SSPLHDDYLS ETPKITDIEN VEYDEEGTKS YPFHLEKETN  60
CETQIEENIE CYEGSCAHDE GVKEPKVGMT FDTIKELSDF YAIYGKKMGF GVYKRSSQKS  120
LNDEETKYVT VACNRAQKSV SKSKNSFNPR PITKTDCGAK VSAVVGADKK WHISKVSLEH  180
NHPFSLSKGR FYRCHRVVNG NVKRVKCSLV LDRVNELKSE ILRGKVSTSS PVCTPHTSAS  240
IRDNNKIRDP NGVQGKGRPA GRIKPTNCNT DNIGCGAENS ETMKKSSKKK CPSQANLTCH  300
QMQQSSHLSS IDGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.25e-11FAR1 family protein