PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020538.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Dof

Protein Properties

Length: 407aa MW: 45010.5 Da PI: 7.2253

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020538.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	116	1.5e-36	108	167	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s+ntkfCyynn +++qPr+fCk+C+ryWt+GG++r +PvG+grrk+k++ Cse_sc020538.1_g030.1 108 PDKILPCPRCESMNTKFCYYNNSNINQPRHFCKTCQRYWTAGGTMRSMPVGAGRRKKKSQ 167 7899*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MMTDPGIILF GKKIGLPETP KTTDPPPFAA ASSDDGLLMD KMCETIDRHE HRLVTQHDQR 60 KDECKPDEEL DDNPKTPSID EEGMSENNQT SGIDGDPMNL QPRTLKKPDK ILPCPRCESM 120 NTKFCYYNNS NINQPRHFCK TCQRYWTAGG TMRSMPVGAG RRKKKSQPSD CRFIITQEAF 180 ESAAAANHIA FAADSDVVQP KVLSFGQNSP HFGARLSSRE NGDACTSGST VIASNQVVEK 240 TQSNNGFQPQ VHWIPGGPWS YNPWNTGMPI PMPIPTVCPP GYPPMPIYHS PYWSSVSWLP 300 PSGSILGKHS TDEEARRPNE SHEEPKKQKS SVLTPKTLRI DDPDDAAKSS IWATLGIKNE 360 NSGRGDLFKA FQAKGDEKKK QTATEPSAAY QANPAAFSRS LCFQERA

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MMTDPGIILF GKKIGLPETP KTTDPPPFAA ASSDDGLLMD KMCETIDRHE HRLVTQHDQR  60
KDECKPDEEL DDNPKTPSID EEGMSENNQT SGIDGDPMNL QPRTLKKPDK ILPCPRCESM  120
NTKFCYYNNS NINQPRHFCK TCQRYWTAGG TMRSMPVGAG RRKKKSQPSD CRFIITQEAF  180
ESAAAANHIA FAADSDVVQP KVLSFGQNSP HFGARLSSRE NGDACTSGST VIASNQVVEK  240
TQSNNGFQPQ VHWIPGGPWS YNPWNTGMPI PMPIPTVCPP GYPPMPIYHS PYWSSVSWLP  300
PSGSILGKHS TDEEARRPNE SHEEPKKQKS SVLTPKTLRI DDPDDAAKSS IWATLGIKNE  360
NSGRGDLFKA FQAKGDEKKK QTATEPSAAY QANPAAFSRS LCFQERA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	3e-68	Dof family protein