PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc020368.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 802aa MW: 93281.1 Da PI: 8.7656

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc020368.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.6	1.8e-22	64	171	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkk 70 kfY++YA+e GF+vr+ +kk+k+n+ t + fvC +eg + + ++ ++ +rr+r+++r+ C+akl++++ Cse_sc020368.1_g020.1 64 KFYKDYAREGGFEVRRGGQKKTKKNDDPTLKYFVCAREGVKPSPTNLnkktnslqtnesqshvvnEVIKRRKRPSQRCRCQAKLRIRR 151 6************************************9877666568899*******9989999************** PP FAR1 71 ekdgkwevtkleleHnHela 90 + ++kw v+k+ ++HnH l+ Cse_sc020368.1_g020.1 152 TPENKWLVYKFLEKHNHRLV 171 ****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 802 aa Download sequence
MLLGEPSTPI SNHNVQHPDI HDDQSVPQVG SYQPTPEGSK FWVPDAKNKP VEGSEFDTLE 60 LALKFYKDYA REGGFEVRRG GQKKTKKNDD PTLKYFVCAR EGVKPSPTNL NKKTNSLQTN 120 ESQSHVVNEV IKRRKRPSQR CRCQAKLRIR RTPENKWLVY KFLEKHNHRL VREEDYMYLK 180 VARKLSFPQQ QLLYHLSNAN LGPTRAWKVF KEMCGGFENI GVTDVECRNY KRGLTNFIGT 240 RDAQMVVEKL LSRQEFGQNF SVEFKRNKAD KTLVGLFWAD EQAKQYYDTF GDVVSFDATF 300 RSNRYNMVLV PFTGIDNHSR CILFGAALLA RESSKRYTWL LKRFKKIFGS APKVVVTDQD 360 PAMKIAIEEQ FPDSRHRLCM WHIMQKLTGK VGPALCSNTD FKRRLCDIVW TDKIEPDVFE 420 SEWSSIMQDF VLNDHKWVKD MFALRYKWIP AYFRHEPMSG LMRTTSRSES ENHFLGQLTN 480 PDLTLVEFLS HYDTAIDSQR YKYKKNTHYS NYTTPDLKTH LQIEKDAAKL YTNTLFYDVQ 540 DEIWSSLMHC CSLSVQESET FCTFVIRDTE ADYKINRSLV EVNYEVKYTP SDSSVQCSCL 600 RYEFYGLLCR HIFYVLRMRK VDHFPMQYLQ TRWSKNPLIL KSVEKSKDDA TASNLDSVLR 660 EIYKNVEQSV THLVGDFEKL QLYKDAQSTL KDKAQIDVPN PPKMNTNAVY AATLGVSEPV 720 KIDIFPPTDI NNKGNRIRTM HKSKSEVAMK LGDKPKRLCR TCGKYTNHDS RNCPTKKEGL 780 QDDDVADVEP FEGEDMDCYY SD

Sequence ? help Back to Top

Protein Sequence Length: 802 aa Download sequence

MLLGEPSTPI SNHNVQHPDI HDDQSVPQVG SYQPTPEGSK FWVPDAKNKP VEGSEFDTLE  60
LALKFYKDYA REGGFEVRRG GQKKTKKNDD PTLKYFVCAR EGVKPSPTNL NKKTNSLQTN  120
ESQSHVVNEV IKRRKRPSQR CRCQAKLRIR RTPENKWLVY KFLEKHNHRL VREEDYMYLK  180
VARKLSFPQQ QLLYHLSNAN LGPTRAWKVF KEMCGGFENI GVTDVECRNY KRGLTNFIGT  240
RDAQMVVEKL LSRQEFGQNF SVEFKRNKAD KTLVGLFWAD EQAKQYYDTF GDVVSFDATF  300
RSNRYNMVLV PFTGIDNHSR CILFGAALLA RESSKRYTWL LKRFKKIFGS APKVVVTDQD  360
PAMKIAIEEQ FPDSRHRLCM WHIMQKLTGK VGPALCSNTD FKRRLCDIVW TDKIEPDVFE  420
SEWSSIMQDF VLNDHKWVKD MFALRYKWIP AYFRHEPMSG LMRTTSRSES ENHFLGQLTN  480
PDLTLVEFLS HYDTAIDSQR YKYKKNTHYS NYTTPDLKTH LQIEKDAAKL YTNTLFYDVQ  540
DEIWSSLMHC CSLSVQESET FCTFVIRDTE ADYKINRSLV EVNYEVKYTP SDSSVQCSCL  600
RYEFYGLLCR HIFYVLRMRK VDHFPMQYLQ TRWSKNPLIL KSVEKSKDDA TASNLDSVLR  660
EIYKNVEQSV THLVGDFEKL QLYKDAQSTL KDKAQIDVPN PPKMNTNAVY AATLGVSEPV  720
KIDIFPPTDI NNKGNRIRTM HKSKSEVAMK LGDKPKRLCR TCGKYTNHDS RNCPTKKEGL  780
QDDDVADVEP FEGEDMDCYY SD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-92	FAR1 family protein