PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc020202.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 143aa    MW: 16421.8 Da    PI: 5.648
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc020202.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.42.2e-102867344
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                           +W++eEde l +  k++  + W+ I + ++ gR++++c +r+
  Cse_sc020202.1_g010.1 28 PWSPEEDEMLQNINKKHNFN-WRQIDEFIP-GRSANSCMLRL 67
                           8*******************.*********.********997 PP
2Myb_DNA-binding39.91e-1273114346
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                            ++T+eEde +++a++++G + W+tIar +   Rt+  +k+++  
  Cse_sc020202.1_g010.1  73 PFTPEEDETILHAHARFGDE-WATIARLLS-ARTGDVIKNHYSL 114
                            79****************99.*********.**********965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MDPIEGPWSP EEDEMLIGPV SLLKKDVPWS PEEDEMLQNI NKKHNFNWRQ IDEFIPGRSA  60
NSCMLRLSLL YRPFTPEEDE TILHAHARFG DEWATIARLL SARTGDVIKN HYSLLKCKSK  120
LMTKGDITIV SLMNVTKTGT FYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.15e-29MYB family protein